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Free Online Textbook
467
views
98
downloads
0
comments
2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.
spatial
sensitivity analysis
gene regulatory networks
stochastic
bifurcation
metabolic networks
electrophysiology
transduction
rate laws
biochemical reactions
Potential Scenario
138
views
56
downloads
0
comments
2008-Abramson-Mathematical modeling of the spread of infectious diseases
These are informal notes, mostly based on the bibliography listed at the end and on recent papers in the field. The practical use of these models is based on the fact that they can be kept realistic enough.
infectious disease
bibliography
epidemic
cowpox
smallpox
complex networks
spread disease
Potential Scenario
132
views
77
downloads
0
comments
2015-Wrona-EtAl-Two-compartment model as a teaching tool for cholesterol homeostasis
To investigate cholesterol transport in the circulatory system, we have previously developed a two-compartment mathematical model. Here, we show how this model can be used as a teaching tool for cholesterol homeostasis
metabolic syndrome
cholesterol
high blood cholesterol
cholesterol homeostasis
Potential Scenario
206
views
72
downloads
0
comments
2017-GR_Gustafson-Differential Equations Course Materials
There are many applications from compartment and cascade analysis, recycling brine tank, home heating with multiple rooms, chemostat, microbes, heartbeats, lidocaine, nutrient flow in an aquarium, biomass transfer, pesticides, forecasting prices,...
chemostat
microbes
biomass
forecasting
transfer
compartment
pesticides
earthquake
tank
heating
lidocaine
brine
heartbeats
nutrient flow
aquarium
electric networks
circuits
logging
building
cascade
Potential Scenario
135
views
62
downloads
0
comments
2016-Barbarossa-Kuttler-Mathematical Modeling of Bacteria Communication in Continuous Cultures
This paper presents a simple system of delay differential equations (DDEs) for quorum sensing of Pseudomonas putida with one positive feedback plus one (delayed) negative feedback mechanism.
gene regulatory networks
chemostat
bifurcation
Numerical Simulation
quorum sensing
Potential Scenario
130
views
49
downloads
0
comments
2010-Shianga-EtAl-Computational model of the human glucose-insulin regulatory system
A computational model of insulin secretion and glucose metabolism for assisting the diagnosis of diabetes mellitus in clinical research is introduced. The
glucose tolerance test
sum of squared residuals
multiple shooting method
cost function
Potential Scenario
155
views
97
downloads
0
comments
2014-John_Cimbala-Dynamic System Response
In this learning module, we discuss the dynamic system response of sensors and their associated electronic circuits.
sensor networks
oscillations
system response
electronic circuit
Potential Scenario
182
views
49
downloads
0
comments
2012-Transtrum-Qiu-Optimal experiment selection for parameter estimation in biological differential equation models
We explore the question to what extent parameters can be efficiently estimated by appropriate experimental selection.
experimental design
systems biology
Association & Data Fitting
reaction rates
decay rates
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