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    Potential Scenario
    136

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    2014-Wang-EtAl-Estimating Mixed-Effects Differential Equation Models
    When multiple replicates of measurements are available for the dynamic process, it is of great interest to estimate mixed-effects in the ODE model for the process. We propose a semiparametric method to estimate mixed-effects ODE models.
    pharmacokineticsdynamic modelssmoothingsplinemixed-effects modelsHiV combination therapy
    Potential Scenario
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    2015-Zhang-EtAl-On the Selection of ODE Models with Application to Predator-Prey Dynamical Models
    We propose a computationally inexpensive approach that employs statistical estimation of the full model, followed by a combination of a least squares approximation (LSA) and the adaptive Lasso.
    least-squares approximationSpline modelingMonte Carlo simulationsvariable selectionadaptive LASSO
    Potential Scenario
    119

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    53

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    2008-Brewer-EtAl-Fitting ordinary differential equations to short time course data
    In this paper, we present a survey of existing algorithms and describe the main approaches. We also introduce and evaluate a new efficient technique for estimating ODEs linear in parameters particularly suited to situations where noise levels are...
    time seriesEvaluation SPLINEgeneleast squaresbifurcation
    Potential Scenario
    599

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    77

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    2023-TechShareNotes. Differential Equations Modeling
    TechShareNotes is a web site with rich differential equation modeling html pages and this one is about mixing in one, two, and three tanks, with interesting questions and problems as well as excellent diagrams and explanations.
    population dynamicspredator-preycircuitreactionspring masspharmacokineticscooling
    Potential Scenario
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    47

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    2006-Thomas_Lingefjard-Faces of mathematical modeling
    In this paper I will discuss and exemplify my perspectives on how to teach mathematical modeling, as well as discuss quite different faces of mathematical modeling.
    teaching modeling
    Article or Presentation
    203

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    59

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    2017-Brian_Winkel-Let_Us_Do_It_Using_Modeling_in_the_Classroom
    In this article the author, Brian Winkel, Director of SIMIODE, attempts to make the case for modeling in the differential equations classroom by giving both rationale and examples.
    differential equationsmodelingclassroom
    Modeling Scenario
    322

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    345

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    5-024-PhGreatLakes
    In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.
    Great Lakeslimnologycomparmentpollutioncompartmental modelsphosphorous
    Potential Scenario
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    53

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    1998-Elly_Claus-McGahan-Modeling Projects in a Differential Equations Course
    Here we discuss the value of student designed, in-depth, modeling projects in a differential equations course and how to prepare them for it.
    projectswritingpopulationtankmixingcomputer-aided analysissprinting
    Article or Presentation
    242

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    528

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    2020-TeachingModule-ModelingNonlethalInfluenzaEpidemic
    We discuss the modeling efforts and tools for success in modeling the spread of nonlethal influenza in an English boarding school
    moduleepidemicboarding schoolTeaching Module
    Potential Scenario
    174

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    75

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    2012-Murray_Bourne-Modeling fish stocks
    Discusses many models of harvesting and consequences.
    fishlogisticmanagementsusustainable developmentharvestfish stockoverpopulatedunsustainable
    Potential Scenario
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    46

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    2005-HP-Hirst-Using the Historical Development of Predator-Prey Models to Teach Mathematical Modeling
    Using the Historical Development of Predator-Prey Models to Teach Mathematical Modeling.
    predator-preyhistory
    Potential Scenario
    200

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    85

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    2009-Peter-Howard-Modeling With ODE
    This is a set of class notes rich in examples and ideas for modeling. There is some MatLab code in support of some of the activities.
    ratescompetitionpopulationepidemicpendulumcarbon datingreaction chemistrymechanicsplanetary motiondrag racingHamilton’s methodvariational method
    Potential Scenario
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    45

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    2013-Alicia_Caldwell-Students Rise to the Challenge of Modeling Yeast Growth Despite Sour Hiccups from Imperfect Data
    This paper describes a lab in which students in an Applied Mathematics in Biology course observe the growth of Saccharomyces cerevisiae, a yeast strain, in differing sugar concentrations for use in learning modeling.
    Saccharomyces cerevisiaelogisticyeastdeathgrowthsugaralcohol
    Potential Scenario
    164

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    2013-Clarke-Skirba-Rationale and resources for teaching the mathematical modeling of athletic training and performance
    It is advisable that the professionals involved learn the various tools available for designing effective training programs.
    fitnessexercise physiologycritical power modelBanister impulse-response modelcoaching educationphysical fitnessperformance modeling
    Free Online Textbook
    143

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    67

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    2015-H_Sayama-Intro to Modeling and Analysis of Complex Systems
    Introduces students to mathematical/computational modeling and analysis developed in the emerging interdisciplinary field of Complex Systems Science.
    textbooktext
    Potential Scenario
    190

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    64

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    1988-EY_Rodin-N_Taber-Yeast Growth Modelling in a Laboratory
    Modeling simple growth with some missing data and doing linear regression for parameter estimation in closed form solution of differential equation model and data.
    regressionyeastgrowth
    Potential Scenario
    150

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    2011-Nguyen-Shi-Modeling the absorption circulation and metabolism of tirapazamine
    This apparently is a student project and it develops the kinetic model, uses Matlab for numerical solution, analytic solution and numerical solution.
    absorptionMichaelis-MentenMetabolismdrug metabolismcirculation
    Potential Scenario
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    2014-Enderling-Chaplain-Mathematical Modeling of Tumor Growth and Treatment
    Herein we describe fundamentals of mathematical modeling of tumor growth and tumor-host interactions, and summarize some of the seminal and most prominent approaches.
    cancertumor modelingangiogenesistumor growthpatient care
    Article or Presentation
    711

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    117

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    SIMIODE Spring 2024 Webinars - Ethics Modeling
    A Practical Guide for Incorporating Ethical Reasoning into Mathematics Courses through Modeling Problems
    modelinginterdisciplinaryguideethicsgroup workethical reasoning
    Potential Scenario
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    2015-Beier-EtAl-Building Context with Tumor Growth Modeling Projects in Differential Equations
    Here we present two projects related to tumor growth appropriate for a first course in differential equations. They illustrate the use of problem-based learning to reinforce and extend course content via a writing or research experience.
    tummor growthresearch experience