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    Potential Scenario
    146

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    2018-Banerjee-EtAl-Prey-Predator Model with a Nonlocal Bistable Dynamics of Prey
    The primary goal of our present work is to consider nonlocal consumption of resources in a spatiotemporal prey-predator model with bistable reaction kinetics for prey growth in the absence of predators.
    predator-preynonlocal consumptionTuring bifurcationspatial Hopf bifurcationspatio-temporal patternprey growth
    Article or Presentation
    173

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    52

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    2010-Kar-Chakraborty-Bioeconomic_modelling_of_a_prey_predator_system_using_differential_algebraic_equations
    We propose a biological economic model based on prey-predator dynamics where the prey species are continuously harvested and predation is considered with type II functional response.
    economicsbifurcationharvestfisheryequilibriumdifferential algebraic equation
    Potential Scenario
    238

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    57

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    2011-Radouane_Yafia-A Study of Differential Equations Modeling Malignant Tumor Cells in Competition with Immune System
    In this paper, we present a competition model of malignant tumor growth that includes the immune system response. The model considers two populations: immune system (effector cells) and population of tumor (tumor cells).
    Immunologytumorhopf bifrucation
    Potential Scenario
    294

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    78

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    2017-Suebcharoen-Analysis of a Predator-Prey Model with Switching and Stage-Structure for Predator
    This paper studies the behavior of a predator-prey model with switching and stage-structure for predator.
    stage structurepredatorpreybifurcationswitching
    Potential Scenario
    154

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    56

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    2006-Cooke-Elderkin-Huang-Predator-Prey interactions with delays due to juvenile maturation
    This paper focuses on predator-prey models with juvenile/mature class structure for each of the predator and prey populations in turn, further classified by whether juvenile or mature individuals are active with respect to the predation process.
    predator-preyhost-parasitebifurcationage structrematuration delay
    Potential Scenario
    131

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    39

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    2008-Yang-EtAl-Differential Equation Model of HIV Infection of CD T-Cells with Delay 
    Abstract: An epidemic model of HIV infection of CD4+ T-cells with cure rate and delay is studied. We include a baseline ODE version of the model, and a differential-delay model with a discrete time delay.
    virusT cellsHopf bifurcationendemic equilibrium
    Potential Scenario
    134

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    62

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    2016-Barbarossa-Kuttler-Mathematical Modeling of Bacteria Communication in Continuous Cultures
    This paper presents a simple system of delay differential equations (DDEs) for quorum sensing of Pseudomonas putida with one positive feedback plus one (delayed) negative feedback mechanism.
    gene regulatory networkschemostatbifurcationNumerical Simulationquorum sensing
    Technique Narrative
    543

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    312

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    1-010-AtmosphericCO2Bifurcation-TechniqueNarrative
    Students are introduced to the concept of a bifurcation in a first-order ordinary differential equation (ODE) through a modeling scenario involving atmospheric carbon dioxide whish is taken as a parameter and temperature is a function of time.
    carbon dioxideSurface Atmosphere Exchangebifurcationfold bifurcationsaddle node
    Potential Scenario
    130

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    49

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    2012-Yuan_Yuan-A coupled plankton system with instantaneous and delayed predation
    We present two simple plankton population models: one has instantaneous predation, another has delayed predation.
    phytoplanktonbifurcationorbitsherbivorous zooplanktoneffect of fishmaturation time delay
    Modeling Scenario
    251

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    219

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    1-135-FishHarvesting-ModelingScenario
    This short activity will walk students through a guided list of questions to help them to understand how the stability of equilibrium changes with changes in a model parameter, in this case the rate of harvesting fish.
    population dynamicsfishstabilitybifurcationharvest
    Technique Narrative
    382

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    211

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    1-009-Bifurcation-TechniqueNarrative
    We lead students to investigate first-order differential equations that contain unknown parameters. Students discover what happens to the qualitative behavior of solutions to these equations as these parameters vary.
    bifurcationqualitative behaviorbifurcation diagram
    Free Online Textbook
    464

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    96

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    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.
    spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions
    Potential Scenario
    162

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    72

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    2017-Guy-Bart_Stan-Modelling in Biology
    This is a very rich set of notes, rich in examples and ideas for modeling. In almost all cases after a model is introduced in real context there is attention to stability analysis.
    spring massbifurcationmass actionlimit cycles
    Modeling Scenario
    212

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    228

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    6-075-LorenzSystemSimulation-ModelingScenario
    The Lorenz system is examined by students as a simple model of chaotic behavior or strange attractor. MATLAB code is created to find the numerical solutions of the Lorenz’ system of nonlinear ordinary differential equations using various parameters.
    chaososcillatorLorenzwaterwheelstrange attractorbifurcation effect
    Potential Scenario
    162

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    43

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    2014-Brun-EtAl-An introduction to the mechanics of the lasso
    Here, we study the mechanics of the simplest rope trick, the Flat Loop, in which the rope is driven by the steady circular motion of the roper’s hand in a horizontal plane.
    bifurcationmotionlassorod modelrodeo
    Potential Scenario
    174

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    45

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    2017-Helen-Byrne-Further Mathematics Biology
    These studies will be in the context of ecological, biological and biochemical applications.
    epidemicschemotaxisenzyme-substrateion channelsnerve pulsesgene proagationtumour
    Potential Scenario
    154

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    48

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    2019-Zhu_EtAl-Partial_differential_equation_modeling_of_rumor_propagation
    This paper defines a spatial distance in online social networks by clustering and then proposes a partial differential equation model with a time delay.
    social networksrumorpropogation
    Potential Scenario
    134

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    52

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    2019-Radulescu-Lundgren-A_pharmacokinetic_model_of_lead_absorption_and_calcium_competitive_dynamics
    We build and analyze a compartmental model of lead pharmacokinetics, focused specifically on addressing neurotoxicity.
    QUBES Leadership Teamparametersabsorptionbifurcationpharmacokineticscalciumcognitive decline
    Potential Scenario
    185

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    78

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    2014-Allen-EtAl-Perturbations in Epidemiological Models -When zombies attack we can survive
    In this paper, we investigate the existence of stability-changing bifurcations in epidemiological models used to study the spread of zombiism through a human population.
    epidemiologydynamical systemszombiesbifurcationperturbation
    Modeling Scenario
    398

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    608

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    1-076-ClimateBifurcation-ModelingScenario
    We cover simple zero and one dimensional models for the mean temperature of the Earth. These models can exhibit bifurcations.
    energy balanceclimateenergyalbedoHysteresisbifurcationice-agegreenhousebalanceStefan Boltzmann Law