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Downloads
Views
Date
Relevance
Potential Scenario
148
views
81
downloads
0
comments
2015-The European Bioinformatics Institute-BioModels Database
BioModels Database is a repository of computational models of biological processes. Models described from literature are manually curated and enriched with cross-references.
computational biology
BioModels Database
bio database
life science experiments
Free Online Textbook
150
views
52
downloads
0
comments
2012-Brian_Ingalls-Mathematical_Modelling_in_Systems_Biology
This text provides an introduction to dynamic mathematical modeling of cellular processes. The emphasis is on using computational tools to investigate models of cellular phenomena.
biology
gene regulatory networks
Models
metabolic networks
signal transduction pathways
electrophysiology
Article or Presentation
169
views
88
downloads
0
comments
2015-European_Bioinformatics_Institute-Bio-Models-Database
Bio Models Database is a repository of computational models of biological processes. Models described from literature are manually curated and enriched with cross-references. All models are provided in the Public Domain.
biology
database
bioinformatics
Models
computational models
Potential Scenario
280
views
98
downloads
0
comments
2006-Wilensky-Reisman-Thinking Like a Wolf a Sheep or a Firefly
We describe a computation-based approach that enables students to investigate the connections between different biological levels using agent-based, embodied modeling tools.
simulation
NetLogo
predator-prey
agent-based
wolf
fox
Free Online Textbook
143
views
70
downloads
0
comments
2009-Eriksson- Estep-Hansho-Johnson-Computational Differential Equations
Differential Equations and Advanced Computational Differential Equations, presents a unified approach to computational mathematical modeling using differential equations based on a principle of a fusion of mathematics and computation.
Galerkin
Potential Scenario
201
views
73
downloads
0
comments
2017-D_Goulet-Modeling, Simulating, and Parameter Fitting of Biochemical Kinetic Experiments
In many chemical and biological applications, systems of differential equations containing unknown parameters are used to explain empirical observations and experimental data. The differential equations are typically nonlinear.
optimization
Biochemistry
sensitivity analysis
chromatography
mass action
cluster analysis
conservation laws
dimerization
estrogen receptor protein
Potential Scenario
160
views
52
downloads
0
comments
2018-Winkle-Igoshin-Bennett-Josic-Ott-Modeling_Mechanical_Interactions_in_Growing_Populations_of_Rod-Shaped_Bacteria
Here, we present an agent-based model that allows growing cells to detect and respond to mechanical interactions.
bacteria
agent-based
populationb
rod-shaped
cellular growth
Potential Scenario
148
views
57
downloads
0
comments
2017-Bonin-EtAl-Mathematical modeling based on ordinary differential equations - promising approach to vaccinology
As a proof of concept, we developed a model of the immune response to vaccination against the yellow fever. Our simulations have shown consistent results when compared with experimental data available in the literature.
immune system
yellow fever
computational immunology
computational vaccinology
General Resource
201
views
48
downloads
0
comments
2003-Knorrenschild-Gross-Text Books on Mathematical Modeling in Biology
Text Books on Mathematical Modeling in Biology Compiled from the Internet by Michael Knorrenschild,
biology
Mathematical Biology
textbook
text
Potential Scenario
163
views
84
downloads
0
comments
2016-Bonin-EtAl-Mathematical modeling based on ordinary differential equations-vaccinology
We developed a model of the immune response to vaccination against the yellow fever. Our simulations have shown consistent results when compared with experimental data available in the literature.
Immunology
immune system
Antigen
vaccinology
yellow fever
Potential Scenario
152
views
48
downloads
0
comments
1999-Peter_Deuflhard-Differential Equations in Technology and Medicine
It deals with a variety of challenging real life problems selected from clinical cancer therapy, communication technology, polymer production, and pharmaceutical drug design.
cancer
design
tumor
drug
polymer
therapy
Potential Scenario
269
views
72
downloads
0
comments
2020-Stepien_Kostelich_Kuang-Mathematics Cancer An Undergraduate Bridge Course in Applied Mathematics
Most undergraduates have limited experience with mathematical modeling. This paper describes a course on the mathematical models of cancer growth and treatment.
differential equations
modeling
undergraduate education
cancer
tumor
Potential Scenario
145
views
64
downloads
0
comments
2017-Brandi-Garcia-Motivating engineering students to math classes - Practical experience teaching ODEs
In this paper we propose an approach to teaching-learning process of mathematical concepts to engineering students with a motivational factor: a practical problem to be modeled in which students must apply concepts seen in class, in particular...
computational tools
teaching
engineering students
practical problem
Potential Scenario
147
views
92
downloads
0
comments
2017-Alex_Honchar-Neural Networks For Solving Differential Equations
In this post I want to show how I applied simple feed-forward NNs to different differential equations with increasing complexity: ODEs, second order ODEs, and, finally, PDEs.
neural networks
Cybenko theorem
diffusion equation
fluid dynamics
Potential Scenario
769
views
73
downloads
0
comments
2013-Fathalla_Rihan-Delay Differential Equations in Biosciences - Parameter estimation and sensitivity analysis
This is a review article to show that delay differential models have a richer mathematical framework (compared with models without memory or after-effects) and a better consistency with biological phenomena such dynamical diseases and cell growth...
epidemiology
sensitivity
Immunology
physiology
RK-methods
time-lags
Potential Scenario
173
views
53
downloads
0
comments
2017-Sim-EtAl-Optimal control of a coupled tanks system with model-reality differences
In this paper, an efficient computational approach is proposed to optimize and control a coupled tanks system.
optimal control
flow
tanks
coupled tanks
Potential Scenario
197
views
49
downloads
0
comments
2018-Nyanginja-Angwenyi-Musyoka-Orwa - Mathematical modeling of the effects of public health education on tungiasis
In this paper, we formulate and study a mathematical model for the dynamics of jigger infestation incorporating public health education using systems of ordinary differential equations and computational simulations.
disease
endemic
reproduction number
tungiasis
jigger infestation
Potential Scenario
144
views
79
downloads
0
comments
2008-William_Revelle-Cues Tendencies and Actions-The Dynamics of Action Revisited
This article describes a reparameterization of the original theory of dynamics of action and applies the power of simple modeling to the study of action, emotions, and social behavior.
psychology
task reference
achievement motivation
dynamics of action
Potential Scenario
121
views
52
downloads
0
comments
2007-Bellomo-De_Angelis-Delitala-Lecture Notes on Mathematical Modelling in Applied Sciences
The Lectures Notes correspond to the first part of the course devoted to modelling issues to show how the application of models to describe real world phenomena generates mathematical problems to be solved by appropriate mathematical methods.
spring mass
Legendre polynomials
integro-differential equations
kinetic theory
Technique Narrative
428
views
206
downloads
0
comments
2-005-LinearizeItAll-TechniqueNarrative
Linear approximations are often used to simplify nonlinear ordinary differential equations (ODEs) for ease in analysis. The resulting linear approximation produces an ODE where closed form solutions may be obtained.
computation
error
Torricelli's Law
data fitting
linear approximation
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