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Downloads
Views
Date
Relevance
Potential Scenario
123
views
71
downloads
0
comments
2006-Shigui_Ruan-Delay differential equations in single species dynamics
In this survey, we shall review various delay differential equations models arising from studying single species dynamics.
allee_effect
delayed biological systems
food limit
periodiciity
recruitment model
Regulation of Haematopoiesis
Potential Scenario
130
views
48
downloads
0
comments
2012-Yuan_Yuan-A coupled plankton system with instantaneous and delayed predation
We present two simple plankton population models: one has instantaneous predation, another has delayed predation.
phytoplankton
bifurcation
orbits
herbivorous zooplankton
effect of fish
maturation time delay
Potential Scenario
134
views
60
downloads
0
comments
2016-Barbarossa-Kuttler-Mathematical Modeling of Bacteria Communication in Continuous Cultures
This paper presents a simple system of delay differential equations (DDEs) for quorum sensing of Pseudomonas putida with one positive feedback plus one (delayed) negative feedback mechanism.
gene regulatory networks
chemostat
bifurcation
Numerical Simulation
quorum sensing
Potential Scenario
173
views
44
downloads
0
comments
2017-Helen-Byrne-Further Mathematics Biology
These studies will be in the context of ecological, biological and biochemical applications.
epidemics
chemotaxis
enzyme-substrate
ion channels
nerve pulses
gene proagation
tumour
Free Online Textbook
162
views
58
downloads
0
comments
2014-Andre_De Ross-Modeling Population Dynamics
This course is intended as an introduction to the formulation, analysis and application of mathematical models that describe the dynamics of biological populations.
predator-prey
competition
population
growth
bifrucation
text
Potential Scenario
294
views
47
downloads
0
comments
2018-Robert_Phair-Differential_equation_methods_for_simulation_of_GFP_kinetics_in_non–steady_state_experiments
Here, we derive new tracer kinetic analytical methods for non–steady state biological systems by constructing mechanistic nonlinear differential equation models of the underlying cell biological processes.
protein quality control
kinetics
Cells
steady state
chemical kinetics
fluouresence
photoactivation
inytracellular
Potential Scenario
200
views
73
downloads
0
comments
2017-D_Goulet-Modeling, Simulating, and Parameter Fitting of Biochemical Kinetic Experiments
In many chemical and biological applications, systems of differential equations containing unknown parameters are used to explain empirical observations and experimental data. The differential equations are typically nonlinear.
optimization
Biochemistry
sensitivity analysis
chromatography
mass action
cluster analysis
conservation laws
dimerization
estrogen receptor protein
Potential Scenario
220
views
65
downloads
0
comments
2011-Lucas_Pulley-Analyzing Predator-Prey Models Using Systems of Ordinary Linear Differential Equations
This research focused on applying biological mathematics to analyzing predation relationships, especially the relationship between the Canadian Lynx and the Snowshoe Hare.
simulation
predator-prey
Lotka-Volterra
population
Canadian Lynx
Snowshoe Hare
critical values
Potential Scenario
182
views
49
downloads
0
comments
2012-Transtrum-Qiu-Optimal experiment selection for parameter estimation in biological differential equation models
We explore the question to what extent parameters can be efficiently estimated by appropriate experimental selection.
experimental design
systems biology
Association & Data Fitting
reaction rates
decay rates
Potential Scenario
135
views
64
downloads
0
comments
2017-Adolfo_Rumbos-Differential Equations and modeling
The study of any phenomenon in the physical or biological sciences, in which continuity and differentiability assumptions about the quantities in question can be made, invariably leads to a differential equation, or a system of differential...
pendulum
Lotka Volterra equations
existence
uniqueness
Potential Scenario
279
views
98
downloads
0
comments
2006-Wilensky-Reisman-Thinking Like a Wolf a Sheep or a Firefly
We describe a computation-based approach that enables students to investigate the connections between different biological levels using agent-based, embodied modeling tools.
simulation
NetLogo
predator-prey
agent-based
wolf
fox
Potential Scenario
111
views
29
downloads
0
comments
2008-Jai-Li-Differential equations models for interacting wild and transgenic mosquito populations
We formulate and study continuous-time models, based on systems of ordinary differential equations, for interacting wild and transgenic mosquito populations.
Mosquito borne diseases
populations
Holling-II-type mating rates
transgenic mosquitoes
nonhyperbolic equilibrium
mosquitoes
Free Online Textbook
148
views
51
downloads
0
comments
2012-Brian_Ingalls-Mathematical_Modelling_in_Systems_Biology
This text provides an introduction to dynamic mathematical modeling of cellular processes. The emphasis is on using computational tools to investigate models of cellular phenomena.
biology
gene regulatory networks
Models
metabolic networks
signal transduction pathways
electrophysiology
Potential Scenario
239
views
97
downloads
0
comments
2017-Chávez-EtAl-Modeling and Analysis of Integrated Pest Control Strategies via Impulsive Differential Equations
The paper is concerned with the development and numerical analysis of mathematical models used to describe complex biological systems in the framework of Integrated Pest Management (IPM).
bifurcations
chaos
impulsive model
limit cycles
hysteretic effects
period-doubling cascades
Potential Scenario
177
views
61
downloads
0
comments
2011-Nancy_Rodrıguez-Applied Partial Differential Equations in Crime Modeling and Biological Aggregation
In the first part we study a fully-parabolic system of PDEs for residential burglary ‘hotspots’ (spatio-temporal areas of high density of crime). In this work we are concerned with the existence and uniqueness of solutions of this model. In
biology
Diffusion
Keller-Segel model
chemotaxis
crime
Potential Scenario
132
views
49
downloads
0
comments
2011-GA_Koch-Noble-Drugs in the Classroom Using Pharmacokinetics to Introduce Biomathematical Modeling
By beginning with simple model involving the half-life of a drug, students take advantage of their mathematical abilities to explore the biology.
Biomathematics
pharmacokinetics
Potential Scenario
161
views
46
downloads
0
comments
1989-EY_Rodin-S_Jaques-Countercurrent Oxygen Exchange in the Swim Bladders of Deep-Sea Fish
Oxygen diffuses from lungs into blood, nutrients diffuse from intestinal tracts into blood and from blood into various cells, and waste products diffuse from cells back into blood.
fish
Cell Membrane
flow
blood
bladder
countercurrent
Modeling Scenario
223
views
255
downloads
0
comments
6-029-TumorGrowth-ModelingScenario
This modeling scenario guides a student familiar with single ordinary differential equation (ODE) models towards the development of a more complex system of two ODEs for describing the evolution of tumor growth over time.
Pop_Growth Pilot
logistic
comparment
tumor
synthetic data
sum of squares error
General Resource
200
views
46
downloads
0
comments
2003-Knorrenschild-Gross-Text Books on Mathematical Modeling in Biology
Text Books on Mathematical Modeling in Biology Compiled from the Internet by Michael Knorrenschild,
biology
Mathematical Biology
textbook
text
Article or Presentation
173
views
52
downloads
0
comments
2010-Kar-Chakraborty-Bioeconomic_modelling_of_a_prey_predator_system_using_differential_algebraic_equations
We propose a biological economic model based on prey-predator dynamics where the prey species are continuously harvested and predation is considered with type II functional response.
economics
bifurcation
harvest
fishery
equilibrium
differential algebraic equation
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