Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by estimating small mammal population sizes using the Lincoln-Peterson model.
549
205
1
06.19.2018

Large Datasets in R - Plant Phenology & Temperature Data from NEON

Megan A. Jones, Lee F. Stanish, Natalie Robinson, Katherine D. Jones, Cody Flagg

Version: 1.0

This module series covers how to import, manipulate, format and plot time series data stored in .csv format in R. Originally designed to teach researchers to use NEON plant phenology and air temperature data; has been used in undergraduate classrooms.
SIAM, Evolution, Excel, data in the classroom, graphing, tool:rstudio, Bar Graphs, minisymposium, phenology, data management, NEON, biomimicry, Selection, Scientific Process, Statistics and Math, Scientific Methodology, Microsoft Excel, temperature, Resources @ SimBio, alleles, environmental gradients, introductory, Lab, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Faculty, Homework, Graduate, Advanced, Majors, 1 Hour, Conference material
621
123
1
05.10.2018
This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of figures, while optional coding extensions teach R skills.
594
157
4
02.19.2018

Products from the NEON Data Education Faculty Mentoring Networks

This module assesses the role of wildfire in the eastern US and its impact on bird communities using NEON bird survey data from pre- and post- a major wildfire in the Great Smoky Mountains National Park (GRSM) in November 2016.
166
143
0
01.07.2019

Data simulation and randomization tests

James S. Santangelo

Version: 1.0

A participatory live-coding lesson on simulating data and performing randomization tests on ecological data in R.
171
85
0
01.03.2019
A participatory live-coding lesson on working with NEON phenology data and fitting a sine-wave model to determine when different species get and lose their leaves.
274
142
0
12.21.2018
Natural disasters and subsequent ecological disturbance events illustrate the complexity of problems in ecology and environmental science, and can be used as effective teaching tools. Unpacking the diverse real-world factors leading up to events offers op
292
136
0
12.11.2018
This resource uses an app hosted on QUBES to visualize similarities and differences in Quercus phenology at three NEON sites in California, Florida, and Massachusetts.
513
151
0
06.22.2018

Environmental Drivers of Ecosystem Carbon Fluxes from Minutes to Years

Christopher Gough, Cindee Giffen, Thomas W Woodward

Version: 1.0

Students build on fundamental concepts of ecosystem production and carbon cycling, combining this knowledge with open long-term data from ecological and meteorological networks to uncover the environmental drivers of carbon fluxes.
genetics, videos, QUBES, ecology, Resources @ HHMI - BioInteractive, java, climate change, Community Ecology, bioinformatics, community, Biodiversity, conference, carbon, climate, plants, Plant Ecology, genomics, digital tools, population ecology, youtube, Biogeochemistry, carbon cycling, Scientific Process, Statistics and Math, ecosystems, earth and environment, human impacts, phenotype, cotelydon, Java String, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, introductory, Lab, Teaching material, High School, Reference material, Abstract, Undergraduate, Graduate, Advanced, Majors, More than 1 hour, Extended Project, Conference material
767
290
1
06.11.2018
This adaptation introduces students to R and the NEON OS & IS data – Plant Phenology & Temperature tutorial. A planned extension will prompt students to develop a testable hypothesis, based on their tutorial insights, that could be investigated locally.
videos, Evolution, genes, ecology, Resources @ HHMI - BioInteractive, data in the classroom, graphing, tool:rstudio, Resources @ Dryad, hypothesis testing, data visualization, botany, climate change, adaptation, bioinformatics, plants, genomics, phenology, forestry, data management, DryadLab, youtube, NEON, screen cast, Natural Selection, hypothesis formulation, environmental pressures, wood structure and function, Scientific Process, Statistics and Math, evolution of populations, temperature, jetstream, introductory, Lab, Online course, Teaching material, High School, Reference material, Abstract, Undergraduate, Faculty, Homework, Advanced, Non-majors, Extended Project, Conference material
498
201
0
06.11.2018

CyVerse Tutorials for NEON Data Science Institute 2018

Tyson Lee Swetnam, Megan A. Jones

Version: 1.0

Resource for conducting data intensive research on CyVerse
394
85
0
06.11.2018
This adaptation consists of three exercises that introduce students to 1) format spreadsheet data tables, 2) carry out spreadsheet quality control, and 3) count/sort/filter data of interest in order to conduct a pilot analysis on NEON small mammal data.
509
168
0
05.18.2018

 

Created by Megan A. Jones Last Modified Mon January 7, 2019 7:55 pm by Megan A. Jones

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