QUBES will have scheduled maintenance work beginning on Wednesday, June 26, 2024, 4pm ET/1pm PT. The platform will operate normally for most of the day, except for an extended outage period lasting no more than 4 hours. All running tool sessions will expire during the maintenance window. Please plan accordingly and we do apologize for any inconvenience. close

Collections

Profile picture of Sam S Donovan

Sam S Donovan created this post

Using Bioinformatics and Molecular Visualization to Develop Student Hypotheses in a Malate Dehydrogenase Oriented CURE

Callahan KP, Mans T, Zhang J, Bell E, Bell J. 2021. Using bioinformatics and molecular visualization to develop student hypotheses in a malate dehydrogenase oriented CURE. CourseSource. 10.24918/cs.2021.43

Abstract

Developing student creativity and ability to develop a testable hypothesis represents a significant challenge in most laboratory courses. This lesson demonstrates how students use facets of molecular evolution and bioinformatics approaches involving protein sequence alignments (Clustal Omega, Uniprot) and 3D structure visualization (Pymol, JMol, Chimera), along with an analysis of pertinent background literature, to construct a novel hypothesis and develop a research proposal to explore their hypothesis. ...

0 comments 0 reposts

Profile picture of Sam S Donovan

Sam S Donovan onto Published papers

Published papers

This is a collection of papers that describe the CURE programs and outcomes. 

4 posts

Profile picture of Sam S Donovan

Sam S Donovan