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Helping students ask questions

  • All students should and can learn to formulate their own questions
  • All educators can easily teach the skill as part of their regular practice

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Kristin Jenkins onto Morphology BIRDD Data

DFMorph (Darwin's Finch Morphology) database

The Darwin's Finch Morphology database contains data, mostly morphological (e.g., beak dimensions), on individual Darwin’s finches. The data are from a number of published and unpublished sources.

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Note: You must be a member of the BIRDD group to explore this data in Radiant.

Bibliography

  • Price, F. and Donovan, S. (2006). "BioQUEST Library VII: BIRDD: Beagle Investigations Return with Darwinian Data Version 2.0 (User Notes)."  BioQUEST Curriculum Consortium.
  • Lack, D.L. (1945). “The Galápagos finches (Geospizinae): a study in variation.” Occasional Papers of the California Academy of Sciences 21: 1-159.
  • Lack, D.L. (1947). Darwin's Finches: an essay on the general biological theory of evolution. Cambridge, England, Cambridge University Press.
  • Lack, D.L. (1969). “Subspecies and sympatry in Darwin's Finches.” Evolution 23: 252-263.
  • Snodgrass, R. E. and E. Heller (1904). “Papers from the Hopkins-Stanford Galapagos Expedition, 1898-99 XVI. Birds.” Proc. Wash. Acad. Sci. 5: 231-372.
  • Sulloway, F. J. (1982). “The Beagle collections of Darwin's Finches (Geospizinae).” Bulletin of the British Museum (Natural History), Zoology series 43: 49-94.
  • Swarth, H. S. (1931). “The avifauna of the Galapagos Islands.” Occ. Pap. Calif. Acad. Sci 18: 5-299.

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Drew LaMar onto Morphology BIRDD Data

Finch Status Dataset

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Drew LaMar onto Island and Habitat BIRDD Data

Phylogeny.fr: Robust Phylogenetic Analysis For The Non-Specialist

Phylogeny.fr is a free, simple to use web service dedicated to reconstructing and analysing phylogenetic relationships between molecular sequences.

Phylogeny.fr runs and connects various bioinformatics programs to reconstruct a robust phylogenetic tree from a set of sequences.

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Drew LaMar onto Molecular BIRDD Data

Island Summary Dataset

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Drew LaMar onto Island and Habitat BIRDD Data

R script for combining site-month NEON data files

This script, with only 3 lines of code, is to help non- or early-R users combine the NEON site-month data that is downloaded from the NEON data portal. 

This R script allows you to combine multiple months & sites of NEON data downloaded as a .zip file from the NEON data portal (data.neonscience.org).  
This script is only for NEON data products that are delivered as zipped folders of .csv files (most OS and IS data products but not AOP data products). 

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Island and Habitat BIRDD Data

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Nicole Chodkowski onto Island and Habitat BIRDD Data

Molecular BIRDD Data

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Nicole Chodkowski onto Molecular BIRDD Data

Morphology Dataset

Over 6500 specimens that were measured by David Lack. These data were transcribed from records deposited at the California Academy of Sciences.

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Citation

  • Lack DL (1947) Darwin's finches: an essay on the general biological theory of evolution, Cambridge University Press.
  • Lack DL (1947) Data from: Darwin's finches: an essay on the general biological theory of evolution. Dryad Digital Repository. https://doi.org/10.5061/dryad.150

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Profile picture of Nicole Chodkowski

Nicole Chodkowski onto Morphology BIRDD Data

BIRDD Morphology Data

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Profile picture of Nicole Chodkowski

Nicole Chodkowski onto Morphology BIRDD Data

Datamethods Discussion Forum

This is a place where statisticians, epidemiologists, informaticists, machine learning practitioners, and other research methodologists communicate with themselves and with clinical, translational, and health services researchers to discuss issues related to data...

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Created by Frank Harrell

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Road Map for Choosing Between Statistical Modeling and Machine Learning

from the Statistical Thinking blog by Frank Harrell

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Drew LaMar onto Machine Learning

Comprehensive list of color palettes available in r

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Drew LaMar onto Data Visualization

A Wes Anderson color palette for R

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Drew LaMar onto Data Visualization

Colors in R

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Drew LaMar onto Data Visualization

R Colors

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Drew LaMar onto Data Visualization

Neuroscience Core Concepts

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Science in the Classroom

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Fundamentals of Neuroscience

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Brain Science Podcast

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Neurotoxins lists

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