Genome Solver - A bioinformatics pipeline for community science
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20 Feb 2024 | Contributor(s): Vinayak Mathur, Gaurav Arora, Anne Rosenwald | doi:10.25334/SEDX-YS29
The Genome Solver was an NSF-funded project developed as a way to train undergraduate life science faculty in basic web-based tools for bioinformatics. As part of the project we developed a one-day workshop consisting of bioinformatics modules on the theme of bacterial genomics, which we...
Using Bioinformatics Activities to understand the Past and Present of SARS-CoV2
30 Jun 2021 | Contributor(s): Gaurav Arora | doi:10.25334/85AH-FF43
We have designed a Bioinformatics activity that uses tools to identify the origins and mutations in the novel SARS-CoV2 strains.
Genome Solver: Building faculty skills in bioinformatics
23 Jul 2020 | Contributor(s): Vinayak Mathur, Gaurav Arora, Vinodh Ganesan, Hita Gupta, Mariana Kazarian, Anne Rosenwald | doi:10.25334/G1B6-JJ53
Genome Solver (GS) began in 2011 as an NSF-funded project for faculty training in basic web-based bioinformatics skills.
Introduction to Genome Annotation
09 Jan 2020 | Contributor(s): Selene Nikaido | doi:10.25334/2ANZ-SV60
This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on genome annotation databases.
Lesson III - Annotation
23 Oct 2019 | Contributor(s): Gaurav Arora | doi:10.25334/9MR2-DX11
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all the A's, C's, T's, and G's.
23 Oct 2019 | Contributor(s): Gaurav Arora | doi:10.25334/2XEK-ME57
Lesson I - Introduction to Genome Solver
31 Oct 2018 | Contributor(s): Anne Rosenwald, Gaurav Arora, Vinayak Mathur | doi:10.25334/Q4C14M
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Part I is the Introduction to the Genome Solver Project.