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    Does Organelle Shape Matter? Exploring Cell Shape through the Allen Cell Explorer and High-content Microscopy Datasets
    The morphology and localization of structures inside the cell are often assumed to fit the ideal images found in biology textbooks. This interrupted case study using high-throughput microscopy data...
    2016

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    1-059-ContainerShapeFallingWater-ModelingScenario
    We examine many different physical situations to determine the time it takes a fixed volume of water to flow out of different shape containers through the same size exit hole at the bottom of the...

    Keywords: containersTorricelli's Lawshapedischarge coefficient

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    2009-G_Recktenwald-Tank Draining Exercise
    This paper describe deep mathematics, including differential equations concerned with modeling the draining of tank and the shape of the water coming out the bore hole at the bottom of the tank of...

    Keywords: laboratorytankLabViewBermoulli equationempty drainingcolumn of liquidpressure

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    The Undergraduate Student’s Guide to Geometric Morphometrics
    Embarking on a new research endeavor can be a daunting task. User guides, books, and published articles are written for an audience that already has some background experience in the field....

    Keywords: researchGeometric Morphometrics"body shape""shape analysis"

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    1-058-WaterClocks-ModelingScenario
    We apply Torricelli's Law to the task of building a water clock in which the height of the water in a container falls at a constant rate when the container has a hole in the bottom to let the...

    Keywords: flowTorricelli's Lawspigotswater clock

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    Learn Biological Sciences and Chemistry through cellular transport and concentration ( online and hands-on)
    Osmosis is a process by which by which solvent move from a region of lower solute concentration to region of higher solute concentration through a semi-permeable membrane. Cells utilize the process...

    Keywords: statisticsdata analysisbiologycell biologyconcentrationskillscellchemistryOsmosisSpectrophotometersolutionsolutesolvent

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    Curvature and Maximum Permissible Speeds
    In this activity students will compute the curvature of a section of commuter rail and use it to determine a safe speed at which a train should can round the corner without tipping or derailing....

    Keywords: data analysiscalculusnumerical approximationengineeringcalculus 3transportation

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    1-105-AnimalFall-ModelingScenario
    This project uses Newton's Second Law of Motion to model a falling animal with a resistance term proportional to cross sectional area of the animal, presumed to be spherical in shape.

    Keywords: animalNetwon's Second Law of Motionfalling bodyterminal velocityair resistanceNewtonair frictionfall

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    1-082-MirroMirror-ModelingScenario
    This project models the ``Foucault Knife Edge Test,'' an optical test commonly used by amateur astronomers who make their own mirrors for reflecting telescopes. The goal of the test is to estimate...

    Keywords: astronomymirror climate change mitigation ocean deacidificationopticstelescopelensFoucaultinterpolation

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    1-053-SlimeSpread-ModelingScenario
    We offer a video showing real time spread of a cylinder of slime and challenge students to build a mathematical model for this phenomenon.

    Keywords: spreadsheetsslime

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    The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior. An introduction to statistical analysis in animal behavior research
    Students investigate the role of olfaction and infochemicals on bird foraging behavior through two different quantitative activities where they generate hypotheses, create figures, conduct data...

    Keywords: Resources @ ESA - TIEEforagingfmnanimal behaviorbehavioral ecologyDIGtrophic cascades

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    The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior
    Students investigate the role of olfaction and infochemicals on bird foraging behavior through three different quantitative modules. In this module students create graphs, generate statistics, draw...

    Keywords: Resources @ ESA - TIEEforagingfmnbehavioral ecologyDIGtrophic cascadesAntarctic foodd webs

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    Does Organelle Shape Matter?: Exploring Patterns in Cell Shape and Structure with High-Throughput (HT) Imaging
    Organelle structure has been studied and visualized for decades; however, publicly available databases that use improved high-throughput microscopy of gene-edited cell lines have recently...

    Keywords: modelingcase studymicroscopystructureOrganellesHigh-throughput (HT)Endoplasmic Reticulum (ER)Fluorescent microscopyHuman Cell Biology

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    Implementing an online module about acoustic biodiversity monitoring in the tropics for use in an undergraduate course
    This implementation plan for an online module organizes activities for understanding physical concepts and biological considerations regarding acoustic monitoring, and provides a Spanish version of...

    Keywords: Biodiversityconservation biologyTropical ecologyacoustic monitoring

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    Maintenance of Cell Shape
    This module introduces an equation to calculate roundness in the context of understanding how myosin contributes to cell shape. It is intended for an introductory biology audience.

    Keywords: AlgebraCell StructureCell Growthbar chart

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    Cold blood and wet skin in hot and dry secondary forests. How do amphibian traits determine persistence in secondary forests?
    Students will synthesize information from biological and physiological traits of amphibians and characteristics of secondary forests in the tropics to form hypotheses about persistence of...

    Keywords: life historyconservation biologyphysiological ecologyamphibianland use changeEctothermsecondary foresttrait-based ecology

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    Restoring tropical forests: Is planting clusters of trees a cost-effective and ecologically-sound strategy to restore tropical forest?
    This module (available in four languages) provides a broad introduction to both ecological and social aspects of tropical forest restoration. It focuses on a long-term study comparing three...

    Keywords: Restoration Ecologyforest restorationtropical forest

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    1-128-RocketFlight-ModelingScenario
    We offer an opportunity to build a mathematical model using Newton's Second Law of Motion and a Free Body Diagram to analyze the forces acting on the rocket of changing mass in its upward flight...

    Keywords: resistanceFlightRocketrymassNewton's Second Law of MotionthrustFree Body Diagramapexrocket

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    A CURE in traits and species distributions: Reproductive modes, range sizes, and natural history collections
    This course-based undergraduate research experience (CURE) focuses on developing hypotheses about how traits influence the range sizes of species. Topics with substantive content include symbioses,...

    Keywords: Evolutionbiostatisticsecologynatural history collectionsSymbiosisspecies distributionsherbariumplant functional traitsLichenReproductive biologyAppalachian mountains

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    Investigating Enzyme Structure and Function Through Model-Building and Peer Teaching in an Introductory Biology Course
    A foundational knowledge of the relationship between structure and function is critical to understanding how enzymes work. The seemingly invisible nature of these molecular interactions makes it...

    Keywords: structure-functionEnzymeallosteric regulationcompetitive inhibitionfeedback inhibitionnoncompetitive inhibitionproductsubstrate

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