You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Salmon, Society, and Success: A case study on the intersections of colonialism, ecological degradation, and the power of social action.
    Using a case study approach, this lesson examines colonialism as an ongoing force affecting nature, culture, and society by focusing on decades of tribally led efforts resulting in recent federal...

    Keywords: ecologyglobal changehuman-environmental interactionsenvironmental justice4DEE Frameworkenvironmental racismsocial and environmental justice

    416

    views

    173

    downloads

    0

    comments

    0

    adaptations

    Implementing an online module about the implications of gold mining in the Amazonian rainforest for a community college ecology course
    This online module describes the implications of gold mining in the Amazon Rainforest, introduces students to ecological concepts, and explores human-environment connections. The implementation...
    207

    views

    82

    downloads

    0

    comments

    0

    adaptations

    2017-Ole_Witt-Hansen-Examples Of Differential Equations In Physics
    This is an article from the author’s homepage. The work contains fundamental and basic background and derivation of the differential equation models for a number of phenomena.

    Keywords: projectileair resistancefree falldragharmonic oscillation

    160

    views

    71

    downloads

    0

    comments

    0

    adaptations

    2017-Bruce_Emerson-Wonderful World of Differential Equations
    This is a terrific set of noted with models and applications woven into the material at every opportunity and data as well. This is introductory differential equations with attention to detail and...

    Keywords: Newton's Second Law of MotionNewton's Law of CoolingreactionsPoiseuille’s Lawstopping distancerate of changeproblemsmodeling opportunities

    126

    views

    79

    downloads

    0

    comments

    0

    adaptations

    2017-Allali-EtAl-Mathematical Modeling of the Adaptive Immune Responses in the Early Stage of the HBV Infection
    The aim of this paper is to study the early stage of HBV infection and impact delay in the infection process on the adaptive immune response, which includes cytotoxic T-lymphocytes and antibodies.

    Keywords: logisticHBV infectionadaptive immunie responseT-lymphocytes

    125

    views

    62

    downloads

    0

    comments

    0

    adaptations

    2014-Groetsch-Yost-Vertical Projection in a Resisting Medium - Revelations on Observations of Mersenne
    This article, inspired by a 17th-century woodcut, validates empirical observations of Marin Mersenne (1588–1648) on timing of vertically-launched projectiles for a general mathematical model of...

    Keywords: resistanceprojectile

    125

    views

    49

    downloads

    0

    comments

    0

    adaptations

    2013-Alicia_Caldwell-Students Rise to the Challenge of Modeling Yeast Growth Despite Sour Hiccups from Imperfect Data
    This paper describes a lab in which students in an Applied Mathematics in Biology course observe the growth of Saccharomyces cerevisiae, a yeast strain, in differing sugar concentrations for use in...

    Keywords: Saccharomyces cerevisiaelogisticyeastdeathgrowthsugaralcohol

    165

    views

    40

    downloads

    0

    comments

    0

    adaptations

    2007-Choisy-Guégan-Rohani-Mathematical Modeling of Infectious Diseases Dynamics
    After presenting general notions of mathematical modeling (Section 22.2) and the nature of epidemiological data available to the modeler (Section 22.3), we detail the very basic SIR epidemiological...

    Keywords: stochasticSIR modeldeterministicincubationinfectives

    109

    views

    51

    downloads

    0

    comments

    0

    adaptations

    2009-Eriksson- Estep-Hansho-Johnson-Computational Differential Equations
    Differential Equations and Advanced Computational Differential Equations, presents a unified approach to computational mathematical modeling using differential equations based on a principle of a...

    Keywords: Galerkin

    126

    views

    65

    downloads

    0

    comments

    0

    adaptations

    2004-Mitchell-von Meien-Krieger-Dalsenter-A review of recent developments in modeling of microbial growth kinetics
    Mathematical models are important tools for optimizing the design and operation of solid-state fermentation (SSF) bioreactors. Such models must describe the kinetics of microbial growth.

    Keywords: Filamentous Fungisolid-state fermentationgrowth kineticsdiffusion-reactionoxygen transfer

    183

    views

    48

    downloads

    0

    comments

    0

    adaptations

    2018-Mohammed_Kaabar-A_Friendly_Introduction_to_Differential_Equations
    In this book, there are five chapters: Laplace Transform, Systems of Homogeneous Linear Differential Equations, Methods of First and Higher Orders DEs, Extended Methods of First and Higher Orders...

    Keywords: textbookordinary differential equations

    164

    views

    53

    downloads

    0

    comments

    0

    adaptations

    1-059-ContainerShapeFallingWater-ModelingScenario
    We examine many different physical situations to determine the time it takes a fixed volume of water to flow out of different shape containers through the same size exit hole at the bottom of the...

    Keywords: containersTorricelli's Lawshapedischarge coefficient

    248

    views

    184

    downloads

    0

    comments

    0

    adaptations

    6-067-LotkaVolterra-ModelingScenario
    This modeling scenario guides students through the process of fitting the Lotka-Volterra model of two differential equations to a real time series observational data. Students use the capabilities...

    Keywords: time seriesdatacompetitionLotka-Volterramodel fittingpredictiongauseRexperimental

    400

    views

    102

    downloads

    0

    comments

    0

    adaptations

    The Legacy of Redlining in Oakland, CA
    The issues of redlining and environmental justice will be introduced and used as a framework for a number of topics in the third part of the semester in a non-majors Environmental Science course.

    Keywords: environmental scienceenvironmental justiceredliningenvironmental racism

    1212

    views

    2266

    downloads

    0

    comments

    0

    adaptations

    Evolution of Caffeine Biosynthesis Enzymes
    This case focuses on exploring why plants make secondary metabolites like caffeine and how the enzymes required for making caffeine evolved.

    Keywords: Evolutioncaffeinemolecular visualization and analysisenzymesPDBMolecular Case Study

    1421

    views

    561

    downloads

    0

    comments

    0

    adaptations

    Using Synthetic Biology to Teach Data Science
    Poster and supplemental materials on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
    1046

    views

    799

    downloads

    0

    comments

    0

    adaptations

    Freezer Full of Fossils v2.0
    The Long Term Evolution Experiment started by Dr. Richard Lenski provides a rich dataset to help students explore concepts of fitness, replication, and adaption.

    Keywords: graphingfitnessadaptationcompetitionSpreadsheet

    2098

    views

    893

    downloads

    0

    comments

    0

    adaptations

    An evolution curriculum designed around understanding the rise and spread of drug-resistant pathogens
    Poster on teaching concepts in evolution and data science skills in an upper level Biology elective at Spelman College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: EvolutionRdata sciencedrug resistanceSummer Workshop 2018

    1377

    views

    158

    downloads

    0

    comments

    0

    adaptations

    2011-Teleken-EtAl-Mathematical modeling of microbial growth in milk
    A mathematical model to predict microbial growth in milk was developed and analyzed. The model consists of a system of two differential equations of first order. The equations are based on physical...

    Keywords: bacteriadairymilkfood safetymicrobilogy

    132

    views

    38

    downloads

    0

    comments

    0

    adaptations

    2011-Nancy_Rodrıguez-Applied Partial Differential Equations in Crime Modeling and Biological Aggregation
    In the first part we study a fully-parabolic system of PDEs for residential burglary ‘hotspots’ (spatio-temporal areas of high density of crime). In this work we are concerned with the existence...

    Keywords: biologyDiffusionKeller-Segel modelchemotaxiscrime

    158

    views

    57

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search