You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Introduction to Mathematical Modeling in Biotechnology, Cell Biology, and Physiology
    The course is a mathematical and computational exploration of five diverse areas of biology: human locomotion, gene sequence analysis, signal transduction pathways involved in cancer,...

    Keywords: mathematical modelingcoursehuman locomotionneuroanatomyneurophysiologysignal transductiongene sequence analysis

    958

    views

    291

    downloads

    0

    comments

    0

    adaptations

    BioNumbers: The Database of Useful Biological Numbers
    A database of biological numbers that you can search and browse.
    1419

    views

    428

    downloads

    0

    comments

    0

    adaptations

    Understanding the Quantitative and Computational Skills of Incoming Biology Students
    Presentation given as part of a Minisymposium at BEER 2015.

    Keywords: assessmentBioSQuaRE

    1387

    views

    206

    downloads

    0

    comments

    0

    adaptations

    2020-TeachingModule-ModelingNonlethalInfluenzaEpidemic
    We discuss the modeling efforts and tools for success in modeling the spread of nonlethal influenza in an English boarding school

    Keywords: moduleepidemicboarding schoolTeaching Module

    207

    views

    428

    downloads

    0

    comments

    0

    adaptations

    Data Analysis for the Life Sciences
    An online stats book written completely in R

    Keywords: Rbiostatisticsstatistical analysisR Markdown

    1308

    views

    390

    downloads

    0

    comments

    0

    adaptations

    Nanoparticles and Shrimp: An Interdisciplinary Lab Series in Chemistry and Biology for Undergraduate Engineering Students
    The parallels between engineering and science are vast, as both disciplines apply theory and inquiry to solve complex problems. In order to prepare students for interdisciplinary careers in STEM,...

    Keywords: microscopychemistry applications in biologytoxicity

    1558

    views

    170

    downloads

    0

    comments

    0

    adaptations

    Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems
    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...

    Keywords: modelingEvolutionecologyagent-based modelingGenetic Driftenvironmental scienceNatural Selectioncompetitive coevolutionsimulation modelingevolutionary reasoning

    2944

    views

    433

    downloads

    0

    comments

    0

    adaptations

    Exploration of the Human Genome by Investigation of Personalized SNPs
    Students often shy away from tedious bioinformatics approaches to exploring their genomes. However, in our expanding digital world these skills are some of the most relevant and valuable. To...

    Keywords: UCSC genome browsersingle nucleotide polymorphismGenome wide association studiesGenomic organization

    1899

    views

    847

    downloads

    0

    comments

    0

    adaptations

    Using Raw Sequence Data to Analyze Tumor Suppressor Mutations
    Learning to identify DNA sequence variants from raw sequencing data (electropherograms) is a basic molecular biology skill with applications to basic research and clinical practice. Yet learning to...

    Keywords: bioinformaticsmutationDNAgenomic visualizationparts of a geneclinical consequencesraw data

    336

    views

    34

    downloads

    0

    comments

    0

    adaptations

    Squirreling Around for Science: Observing Sciurid Rodents to Investigate Animal Behavior
    Hands-on research experiences are important opportunities for students to learn about the nature of inquiry and gain confidence in solving problems. Here, we present an inquiry-based lesson plan...

    Keywords: foragingbehaviorbehavioral ecologySciuridSquirrelSquirrel-NetTrade-offVigilance

    2796

    views

    1009

    downloads

    0

    comments

    0

    adaptations

    Using the Cell Engineer/Detective Approach to Explore Cell Structure and Function
    As instructors of introductory biology courses for majors and non-majors, we have struggled with teaching the concept of cell structure and function in an engaging way.  However, this is a...

    Keywords: cell functionCell StructureCellular diversityDynamic cellular functionOrganelle function

    3139

    views

    1260

    downloads

    0

    comments

    0

    adaptations

    A Strategy for Teaching Undergraduates to Write Effective Scientific Results Sections
    Most undergraduate instructors would agree that learning to write about data in the style of a scientific research paper is a worthy goal for their students.  However, many hesitate to tackle...

    Keywords: data analysisprimary literaturescientific writingcommunicating science

    2826

    views

    451

    downloads

    0

    comments

    0

    adaptations

    Plotting Cranial and Spinal Nerve Pathways in a Human Anatomy Lab
    Hands-on experiences with cadavers, animal dissections, or plastic models are effective at improving student learning and attitudes in human anatomy courses. The hands-on experience allows students...

    Keywords: human anatomyNervous systemBrainCranial nerveNerveSpinal cordSpinal nerve

    1689

    views

    327

    downloads

    0

    comments

    0

    adaptations

    R for biologists
    An introductory guide to data analysis in R for life sciences researchers.

    Keywords: R

    1011

    views

    401

    downloads

    0

    comments

    0

    adaptations

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses
    Introductory bioinformatics exercises often walk students through the use of computational tools, but often provide little understanding of what a computational tool does "under the...

    Keywords: BLASTmultiple sequence alignmentsequence similarityphylogramZika virusAlgorithmScoring Matrix

    1907

    views

    634

    downloads

    1

    comments

    0

    adaptations

    Priority Setting in Public Health: A lesson in ethics and hard choices
    Undergraduate life sciences majors, many of whom aspire to work in healthcare and health research, can benefit from early exposure to ethical issues that they may encounter in these careers. This...

    Keywords: public health ethicsramifications of one's decisionsrole of science in society

    1280

    views

    271

    downloads

    0

    comments

    0

    adaptations

    The Leaky Neuron: Understanding synaptic integration using an analogy involving leaky cups
    Students have difficulty understanding synaptic integration in neural circuits, and how spatial and temporal summation combine in a target neuron to reach threshold.  This Lesson uses small...

    Keywords: neuron physiologyspatial summationsynaptic integrationtemporal summationthreshold

    2421

    views

    258

    downloads

    0

    comments

    0

    adaptations

    1994-M_Yamaguti-Discrete Models in Social Sciences
    Also, a finite difference model in sociology is given as a chaotic phenomenon.

    Keywords: economicschaossociologydiscretediscretization

    103

    views

    41

    downloads

    0

    comments

    0

    adaptations

    Teaching Cancer Biology Through a Lens of Social Justice
    The biology classroom is not separate from the greater context of society; social issues can and should be presented in connection with the content. Here we present an example of antiracist...

    Keywords: assessmentcancersocial justicePOGILAlignmentPublic ExamPublic

    4546

    views

    700

    downloads

    0

    comments

    0

    adaptations

    Making toast: Using analogies to explore concepts in bioinformatics
    Contemporary biology is moving towards heavy reliance on computational methods to manage, find patterns, and derive meaning from large-scale data, such as genomic sequences. Biology teachers are...

    Keywords: bioinformaticsworkflowgenome

    865

    views

    179

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search