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    Robot vs. Disease: Using CellProfiler to model biomedical research in your classroom
    Resource from the 2015 BioQUEST Summer Workshop

    Keywords: image analysisCellProfilerfluorescence microscopymicroscopycellular analysis

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    Making toast: Using analogies to explore concepts in bioinformatics
    Contemporary biology is moving towards heavy reliance on computational methods to manage, find patterns, and derive meaning from large-scale data, such as genomic sequences. Biology teachers are...

    Keywords: bioinformaticsworkflowgenome

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    A Hybrid Virtual Kinesiology Laboratory Module for Human Anatomy and Physiology
    The integration of virtual technology is becoming a common trend in anatomy education at the undergraduate and graduate levels. The incorporation of virtual 3D anatomical models into the classroom...

    Keywords: kinesiologyexercise physiologyAnaerobic RespirationMaximum Oxygen ConsumptionMuscular SystemVirtual AnatomyWingate Test

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    The ACTN3 Polymorphism: Applications in Genetics and Physiology Teaching Laboratories
    Inquiry-based undergraduate laboratories provide the opportunity to engage students in a research experience that improves scientific thinking, but such activities can be difficult to develop and...

    Keywords: protein structure and functionhuman genetic variationmuscle physiology

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    A Tough Choice in Watershed Management
    In this Team-based activity, students work in teams, playing the role of natural resource managers who must decide in which region to invest limited funding for nutrient reduction in streams....

    Keywords: Stream ecologyBox PlotsSpreadsheetGroup cooperative learningTeam-based LearningBiogeochemical cycles

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    Implementing an online module about measuring carbon stocks in an undergraduate Earth Science course
    In this implementation of a case study in which high technology was used to measure carbon stocks in a tropical forest, earth science students in this 4-year college in Oklahoma applied concepts...

    Keywords: climate changephotosynthesisbiomasscarbon cyclegreenhouse gas effect

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    5-026-Evictions-ModelingScenario
    In this project, students develop two SIS models to study eviction trends in a population of non-homeowner households using an actual eviction rate. Students can calculate solutions, sketch the...

    Keywords: carrying capacitycompartmentevictionhomeownerSIS modelhomelessness

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    9-002-GroundWaterFlow-ModelingScenario
    The goals of this project are to compare a conceptual one-dimensional groundwater flow model to observations made in a laboratory setting, and to discuss the differences.

    Keywords: sgroundwater flowDarcy's Lawheat equationaquiferhydraulic headFourier's Lawsand tank

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    2020-TeachingModule-SpreadOfCommonColdSimulation
    This simulation is meant to introduce the idea of a differential equation model and investigate the impact of heightened hygiene and decreased interactions on the spread of an infectious disease....

    Keywords: simulationmoduleinfectious diseasediseasespreadTeaching Modulespread of disease

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    STEM as Culture: Exploring exclusion and inclusion in mathematics and biology
    This is a paper given as a plenary lecture at the second CalcConf in Bergen, Norway, June 2023. The paper explores how marginalization in society & living between worlds becomes a superpower in...

    Keywords: calculusbiocalculusrule of fivemarine biologyco2Microagressionsmauna keamauna loafeministtestimonioindigenous epistomologyanzalduagutierrezdisciplinary microaggressions

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    3-100-Ripcord-Toys-ModelingScenario
    This modeling scenario examines the motion of a ripcord-powered toy with the goal of using real data to estimate parameters in a first-order model of the velocity of the toy. Students may conduct...

    Keywords: dataphysicsdynamicsdata collectionrollingslippingripcordtoy

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    Biodiversity Counts! Making sense of diversity metrics and graphs
    In this lesson students 1) become familiar with various graphs that are used to study diversity patterns within and across sites, 2) learn about some of the questions that can be addressed by...

    Keywords: graph interpretationfmnmetabarcodingbiodiversity literacyBioGraphIrepresentation in STEMalpha diversitybeta diversity

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    1-125-DiceyPopulation-ModelingScenario
    We offer students an opportunity to generate data for their team on a death and immigration model using 12 and 20 sided dice and then pass on the data to another student team for analysis with a...

    Keywords: simulationimmigrationdeathdice

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    Making “sense” out of surface area to volume relationships
    Using a multimodal approach, the non-linear aspect of the surface area to volume relationship is explored. Students use their their senses of taste and sight to determine how smaller cells and...

    Keywords: active learningintroductory biologycell biologyquantitative skillskinesthetic learningLDC2023

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    1994-Paul_Davis-Asking Good Questions about Differential Equations
    A general essay about the Rule of Three – numerical, algebraic, and graphical perspectives + modeling with one illustration about Irish population.

    Keywords: questionspopulationnumericalphysical contextgraphicalalgebraicIreland

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    BSL-4: Authorized Personnel Only
    National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection

    Keywords: infectious diseaseexperimental designbioinformaticsEbolaNIBLSECase It!PCRBLASTmultiple sequence alignmentPublished in National Center for Case Study Teaching in Sciencepolymerase chain reactionfebrile illnessvirusELISAenzyme linked immunosorbent assayfilovirusAfrica

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    Field sketching, geomorphic data, and the power of perspective
    Sketching is a powerful tool to capture observations about the landscape and preserve a picture of a field site at a particular time. At the same time, our perspectives, be they disciplinary,...

    Keywords: sketchingstream dischargedata collectionGeomorphologyRiver Field Studies Networkgrain sizeperspective

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    Exploring Detritus-Based Food Webs in Streams
    This two-part field lesson for mid- to upper-level undergraduates connects allochthonous inputs to the invertebrate consumers that depend on them. After preparing students with background...

    Keywords: aquatic macroinvertebratesfunctional feeding groupallochthonousorganic matterleaf packRiver Field Studies Network

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    1-030-EyeModel-ModelingScenario
    We offer a mathematical modeling experience using differential equations to model the volume of an intraocular gas bubble used by ophthalmologists to aid the healing of a surgically repaired region...

    Keywords: retinal surgeryAkaike Information CriterionSpanishsum of square errorssurgeryretionaophthalmologyeyeintraocular gas bubble

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    1-028-SouthernSweetIcedTea-ModelingScenario
    We offer raw data collected from a webcam and a thermometer for evaluating the strength of steeping tea. We ask students to build a mathematical model using the data to predict how long the tea...

    Keywords: dataNewton's Law of Coolingteasweet tea

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