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Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Tools: New tools for new science
    A collection of computational, modeling and data analysis tools developed at Microsoft Research Labs.

    Keywords: modelingdata analysisdatacomputational toolsdata visualization

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    Transitioning Two-Stage Exams to an Online Class
    Students often find biology courses to be very difficult and isolating, particularly if they identify as part of a group that has been historically excluded from STEM. Some of this anxiety and...

    Keywords: lower division STEMupper division STEM

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    Teaching Data Viz and Communication as an Undergraduate Biology Course: Assignments and Projects
    Teaching materials co-developed for a new upper-level undergraduate biology course to teach data exploration and communication without requiring previous coding experience.

    Keywords: data visualizationR programming languagedata literacycalling bulldata viztidy dataOur World in DataDear Data

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    Enabling authentic ecological inquiries using research data and imageries in large classrooms
    Presentation made by Ben Wu et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of America annual...

    Keywords: Ecological Society of America

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    REMNet Tutorial, Excel Part 4: Focusing on Taxonomy 4.26.19
    Video on analyzing microbiome data in Excel from the Research Experiences in Microbiomes Network

    Keywords: The Analysis of Biological DataExcelVideoMicrobiology Educationteaching with technologymicrobiomesSwirlresearch in the classroomREMNeturban microbiomes

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    Should we synthesize a human genome?
    Two articles introducing the Human Genome Project-Write and asking questions about the ethics of the project.

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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    Examining human impacts on tusk evolution in elephants using authentic research data using Serenity
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
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    Guided Goal Setting for Mentors and Mentees
    We provide a framework for research mentors and mentees to talk together and explicitly discuss expectations, assumptions, and goals for each party.

    Keywords: Undergraduate Mentorshipstudent mentoring and traininggoals

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    Undergraduate Research at Lane Community College
    Session presentation on CURES at Lane Community College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: undergraduate researchcommunitySummer Workshop 2018CUREs

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    Confronting the challenges of bringing research data into undergraduate classrooms using online faculty mentoring networks
    Poster on using ecological research data in undergraduate courses

    Keywords: Ecological Society of Americafmn

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    HSI - Student Research Journal - Vol.1 Issue 2 - Fall 2020 v.1.0
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 1 - Issue 2 - Fall 2020...

    Keywords: scientific methodscience education

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    Evaluation of DEIJ practices in learning spaces
    Our Accelerating Systemic Change Network (ASCN) Working Group 5 is a group which focuses on DEIJ - Diversity, Equity, Inclusive and Justice. Taking into account the evolution of learning...

    Keywords: stemassessmentUndergraduatescienceFacultyriosDEIJASCNlearning space

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    Creating Game-Based IDEAs using Twine (BIOME 2022)
    Games and gamification-principles are powerful tools that increase engagement and improve learning outcomes when applied appropriately to STEM instruction. The interactive nature of games allows...
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    Exploring the ecological niches and bioclimatic differences of the greater and lesser Capybara
    In my study, I explored the differences in ecological niches and bioclimatic preferences of the Greater and Lesser Capybara. Wallace was used in obtaining the locality and bioclimatic data...

    Keywords: ecology

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    Improving Civic and Scientific Literacy through Scaffolded Thematic Classroom Research Experiences
    Poster on encouraging civic and scientific literacy presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: scientific literacyauthentic researchcivic literacySummer Workshop 2018

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    Teaching Cancer Biology Through a Lens of Social Justice
    The biology classroom is not separate from the greater context of society; social issues can and should be presented in connection with the content. Here we present an example of antiracist...

    Keywords: assessmentcancersocial justicePOGILAlignmentPublic ExamPublic

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    Effects of Airport Runoff Pollution on Water Quality in Bay Area Sites Surrounding San Francisco and Oakland Airports
    Airports contribute to pollution through point source and non point source pollution, which can have a negative effect on water quality and aquatic life. The purpose of the study was...

    Keywords: water quality

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    Digging up history with a ‘real-life Indiana Jones’ Dr. Sarah Barber
    In this exciting talk, Dr. Sarah "Stacy" Barber discusses her exciting research covering: 1. Documentation of geological, hydrodynamic, and ecological change in the Indian River Lagoon, and 2....

    Keywords: human impactsarchaeology

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    5-026-Evictions-ModelingScenario
    In this project, students develop two SIS models to study eviction trends in a population of non-homeowner households using an actual eviction rate. Students can calculate solutions, sketch the...

    Keywords: carrying capacitycompartmentevictionhomeownerSIS modelhomelessness

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    Why representation matters: Interpreting data to identify factors that affect Black students’ persistence in STEM
    In this lesson, learners interpret a table summarizing the factors influencing the persistence of Black students at an HBCU. Then, learners view and reflect on an interview with science education...

    Keywords: biologydata interpretationhbcuSelf-EfficacyBioGraphIrepresentation in STEM#BIPOCinSTEMBlack representation in STEM

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