You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    2016-I-Liang_Chern-Mathematical Modeling_and_Ordinary_Differential_Equations
    We let the author's Table of Contents speak for itself.

    Keywords: differential equationsmodelingtextbook

    178

    views

    40

    downloads

    0

    comments

    0

    adaptations

    2018-Weber_Theers_Surmann_Ligges_Weihs-Sensitivity Analysis_of_Ordinary_Differential_Equation_Models
    This report will focus on the sensitivity analysis of ordinary differential equation (ODE) models since they can be used to model so-called Low Frequency Oscillations (LFOs).

    Keywords: sensitivityregressionparameter estimationsystemlow frequency oscillationsoscillations

    125

    views

    41

    downloads

    0

    comments

    0

    adaptations

    2019-Radulescu-Lundgren-A_pharmacokinetic_model_of_lead_absorption_and_calcium_competitive_dynamics
    We build and analyze a compartmental model of lead pharmacokinetics, focused specifically on addressing neurotoxicity.

    Keywords: QUBES Leadership Teamparametersabsorptionbifurcationpharmacokineticscalciumcognitive decline

    102

    views

    42

    downloads

    0

    comments

    0

    adaptations

    2019_Isaac_Eshakoff-Differential_Equations_of_Love_and_Love_of_Differential_Equations
    In this paper, simple ordinary differential equations are discussed against the background of William Shakespeare’s Romeo and Juliet.

    Keywords: mathematical modelsystemmechanicalRomeo and Julietlovelove-hatejealousyShakespeare

    106

    views

    43

    downloads

    0

    comments

    0

    adaptations

    2019-Stender_EtAl-Recovery_Of_Differential_Equations_From_Impulse_Response
    In this work, a recent method, which allows reconstructing differential equations from time series data, is extended for higher degrees of automation.

    Keywords: time seriesregressionresponseimpulseoscillationsignal processingsparse regressionsystem identification

    767

    views

    39

    downloads

    0

    comments

    0

    adaptations

    2020-Chen_Et_Al-MathModel_Simulation_Phase-Based_Transmissability_Corona_Virus
    In this study, we developed a Bats-Hosts-Reservoir-People transmission network model for simulating the potential transmission from the infection source (probably be bats) to the human infection.

    Keywords: basic reproduction numbercoronavirusnext generation matrixtransmissibilitynovel coronavirus

    92

    views

    35

    downloads

    0

    comments

    0

    adaptations

    Bringing Pasteur Back to Life: Studying the Biochemistry of Yeast Fermentation Through Discussion Groups and an At-Home Lab
    This hands-on, student-centered biochemistry lesson introduces beginner biochemistry students to the techniques of effectively reading and discussing primary literature, identifying fundamental...

    Keywords: primary literatureexperimentationyeastMetabolismFermentationRespirationequilibrium

    3246

    views

    217

    downloads

    0

    comments

    0

    adaptations

    SARS-CoV-2: Understanding, Applying and Communicating Science
    The ability to integrate process of science training with necessary skills in applying and communicating core theories in biological science and biology quantification, has been brought into focus...

    Keywords: process of science#COVID19 #SARSCOV2 #SciComm #studentdiscovery

    404

    views

    255

    downloads

    0

    comments

    0

    adaptations

    1935 GFGause Article Predator Prey Oscillations
    N/A

    Keywords: Lotka-Volterrapredatorparameciumpreycycleoscillate

    126

    views

    42

    downloads

    0

    comments

    0

    adaptations

    6-070-BeerBubbles-ModelingScenario
    The goal of this project is to set up and numerically solve a first-order nonlinear ordinary differential equation (ODE) system of three equations in three unknowns that models beer bubbles that...

    Keywords: molecular forensicsBEERspherebubbleNewton' Second LawIdeal Gas Lawdrag forceHadamardStokesmole

    228

    views

    401

    downloads

    0

    comments

    0

    adaptations

    Modified Grassy Narrows and Muskrat Falls Dam: Hypothesis Testing and t-Tests
    Methylmercury contamination within fish populations is an important toxin that affect human, animal, and environmental health, serving as a carcinogen (cancer-causing agent) and endocrine-disruptor...

    Keywords: statisticsmathematicsbiostatisticsecologybiologygraphingp-valuest-testshypothesis testingin-class activityZoologymercury biogeochemistrybiostatistics - generalfish populationqbccEndocrine DisruptorsBiogeochemical cyclesInterpret graphsSolving Equations and InequalitiesConcepts in StatisticsElementary Hypothesis TestingMethylmercurydamsBioaccumulationtraditional dietsmercurymercury poisoningnative peopleindigenous populationCanadahydroelectricexplaining statisticsusing statisticsMake probability calculationsbiomagnification

    555

    views

    532

    downloads

    0

    comments

    0

    adaptations

    How to Find a Gene: Retrieving Information From Gene Databases
    A strong understanding of distinct gene components and the ability to retrieve relevant information from gene databases are necessary to answer a diverse set of biological questions. However, often...

    Keywords: NCBItranscriptiontranslationGene StructureGene databasesEnsembl

    1433

    views

    337

    downloads

    0

    comments

    0

    adaptations

    Go Extinct! An Award-Winning Evolution Game That Teaches Tree-Thinking as Students Pursue the Winning Strategy
    Evolutionary trees communicate both the diversity and unity of life, a central and important scientific concept, as highlighted by the Vision and Change undergraduate biology education movement....

    Keywords: phylogeneticsnatural historyBiodiversitycladogramCommon ancestorEvolutionary treeLand vertebratesMonophyletic cladeTetrapods

    2370

    views

    379

    downloads

    0

    comments

    0

    adaptations

    6-003-SchoolFluEpidemic-ModelingScenario
    We offer a model of the spread of flu in a school dormitory and are asked to find when the flu levels reach their peak and explain long term behavior of the spread of the flu.

    Keywords: infectionepidemicSIR modelflupeakschool children

    125

    views

    98

    downloads

    0

    comments

    0

    adaptations

    6-004-VillageEpidemic-ModelingScenario
    Students are offered data from a plague epidemic that occurred in the middle of the seventeenth century in Eyam, a small English village. With only two assumptions offered to students they...

    Keywords: SIR modelsepidemicsusceptibleinfectiveremovedEyamEnglish village

    193

    views

    145

    downloads

    0

    comments

    0

    adaptations

    9-125-BeamModeling-ModelingScenario
    This modeling scenario examines the deflection of a cantilever beam under two different distributed loads. Students will have the opportunity to conduct experiments with their own cantilever beam...

    Keywords: Fluid MechanicsbeamcantileverimpulseLaplace transformboundary conditionfourth order

    176

    views

    226

    downloads

    0

    comments

    0

    adaptations

    Sanger Sequencing by Hand: Using Paper Clips to Demonstrate Chain Termination
    Sanger sequencing is commonly taught with a hands-on approach. Sanger sequencing involves chain termination by dideoxynucleotides, because they are missing the oxygen on the 3’ carbon atom,...

    Keywords: nucleotidessequencingDNAgel electrophoresisChain Termination

    1057

    views

    209

    downloads

    0

    comments

    0

    adaptations

    Distances in the Universe: An Inquiry Lab Sequence Taught in West Africa and North America
    Astronomy evokes deep curiosity for many people, making it a beautiful topic for supporting students to learn scientific practices and develop as scientists. We present an inquiry-based lab...

    Keywords: InquiryAstronomy labParallaxInverse-square law for lightCosmic distance ladderAsking investigable questions

    2376

    views

    380

    downloads

    0

    comments

    0

    adaptations

    An Original-Design Board Game to Increase Student Comprehension of Cellular Respiration Pathways
    Cellular respiration is a daunting topic for many students in introductory biology courses. Students are challenged at conceptual and factual levels, since instruction covers multiple metabolic...

    Keywords: GlycolysisCellular RespirationFermentationKrebs CycleOxidative phosphorylationpyruvate oxidation

    2572

    views

    447

    downloads

    0

    comments

    0

    adaptations

    Effect of the Intestinal Protein Snakeskin on the Lifespan of Fruit Flies: A Kaplan-Meier Survival Analysissource Draft (1)
    In this activity, students perform the Kaplan-Meier survival analysis on raw data obtained from an experiment that explores the effect of overexpressing the Snakeskin (Ssk) protein on the lifespan...

    Keywords: graphingBiochemistryhypothesis testingcalculus and biologyapproximating areas under curvesqbccCellular and Molecular BiologyCreate graphsInterpret graphsSolving Equations and Inequalitiesinterpret tablesConcepts in Statisticsusing statisticschi-square analysissurvival analysis

    1360

    views

    167

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search