You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Using Bioinformatics and Molecular Visualization to Develop Student Hypotheses in a Malate Dehydrogenase Oriented CURE
    Developing student creativity and ability to develop a testable hypothesis represents a significant challenge in most laboratory courses. This lesson demonstrates how students use facets of...

    Keywords: bioinformaticsNoncovalent InteractionsEnzyme CatalysisProtein Structure/function

    4037

    views

    615

    downloads

    0

    comments

    0

    adaptations

    A Hands-on Introduction to Hidden Markov Models
    In this Lesson, we describe a classroom activity that demonstrates how a Hidden Markov Model (HMM) is applied to predict a eukaryotic gene, focusing on predicting one exon-intron boundary. This HMM...

    Keywords: transcriptionexonintronsplicing

    3369

    views

    662

    downloads

    0

    comments

    0

    adaptations

    Outside the Norm: Using Public Ecology Database Information to Teach Biostatistics
    Biology students’ understanding of statistics is incomplete due to poor integration of these two disciplines. In some cases, students fail to learn statistics at the undergraduate level due...

    Keywords: biostatisticshypothesis testingexperimental design

    974

    views

    155

    downloads

    0

    comments

    0

    adaptations

    The ACTN3 Polymorphism: Applications in Genetics and Physiology Teaching Laboratories
    Inquiry-based undergraduate laboratories provide the opportunity to engage students in a research experience that improves scientific thinking, but such activities can be difficult to develop and...

    Keywords: protein structure and functionhuman genetic variationmuscle physiology

    1143

    views

    340

    downloads

    0

    comments

    0

    adaptations

    Antibiotic Resistance Genes Detection in Environmental Samples
    Our aim is to provide an authentic research experience for undergraduate students in a variety of biology courses through collaboration between a four-year university and a community college. This...

    Keywords: geneticsenvironmentmicrobiologyUndergraduateantibiotic-resistancePCRgel electrophoresisauthentic inquiry

    2129

    views

    441

    downloads

    0

    comments

    0

    adaptations

    RNAseq data analysis using Galaxy
    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    Keywords: LabbioinformaticsNCBImappingUndergraduateworkflowNIBLSEGalaxyRNAseqgene expressionAdvancedExtended ProjectArabidopsisC1. Role of bioinformaticsC2. Computational conceptsC3. Statistical conceptsC5. Data retrievalIncubated at NIBLSEdifferentially expressed genes

    1525

    views

    230

    downloads

    0

    comments

    0

    adaptations

    Chapter 9: One-way analysis of variance
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language....

    Keywords: biostatisticsR programming language

    966

    views

    553

    downloads

    0

    comments

    0

    adaptations

    Wing Aspect Ratio and Morphological Measurement Analysis Relating to Bird Flight and Natural History
    This activity simulates analysis and identification of bird specimens based on the relationship of the natural history of bird species with the morphographic measurements and ratios compared to...
    4917

    views

    512

    downloads

    0

    comments

    0

    adaptations

    Data Analysis for the Life Sciences
    An online stats book written completely in R

    Keywords: Rbiostatisticsstatistical analysisR Markdown

    1345

    views

    399

    downloads

    0

    comments

    0

    adaptations

    Climate Change Module (Project EDDIE)
    Students explore how climate is changing from the recent record. Produced by Project EDDIE.
    1274

    views

    1671

    downloads

    0

    comments

    0

    adaptations

    Climate Change Module (Project EDDIE)
    Students explore how climate is changing from the recent record. Produced by Project EDDIE.

    Keywords: climate dataclimate changevolcanoes and climateclimate trends

    863

    views

    456

    downloads

    0

    comments

    0

    adaptations

    1-030-RandomPerturbation-TechniqueNarrative
    After a brief historical view of this problem, we will demonstrate the derivation of first order linear differential equations with random perturbations.

    Keywords: random perturbationBrownian motionLangevin equationRiemann-Steiltjes integralWiener processIto's calculus

    310

    views

    181

    downloads

    0

    comments

    0

    adaptations

    Climate Change Module (Project EDDIE)
    Students explore how climate is changing from the recent record. Produced by Project EDDIE.
    708

    views

    136

    downloads

    0

    comments

    0

    adaptations

    Climate Change Module (Project EDDIE)
    Students explore how climate is changing from the recent record. Produced by Project EDDIE. This module was adapted for students using R and RStudio.
    688

    views

    257

    downloads

    0

    comments

    0

    adaptations

    Understanding Global Climate Change: Present, Past, and Future
    Understanding global climate change through the lenses of the present, past, and future, combining modern technology and indigenous knowledge and ways of knowing.

    Keywords: climate changeglobal changeabiotic environmentindigenous knowledge

    1293

    views

    1528

    downloads

    0

    comments

    0

    adaptations

    Climate Change Module (Project EDDIE)
    Students explore how climate is changing from the recent record. Produced by Project EDDIE.
    1547

    views

    392

    downloads

    0

    comments

    9

    adaptations

    Adapted Value of Mistakes
    This module is adapted from BIOMAAP materials on the value of mistakes and application of growth mindset in a microbiology lab.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

    1363

    views

    345

    downloads

    0

    comments

    0

    adaptations

    Strategies for developing a science communicator through authentic science writing assignments
    To prepare biology undergraduates to be able to read and evaluate the primary literature, it is beneficial to teach students how to write documents in the style of professional science style...

    Keywords: communicationPeer reviewscience writing

    894

    views

    178

    downloads

    0

    comments

    0

    adaptations

    1998-K_H_Louie_Clark-P_C_D_Newton-Analysis of differential equation models in biology-clover meristem populations
    A simple differential equation model (dynamical system) for clover, based on meristem numbers, is outlined and analysed mathematically.

    Keywords: sensitivity analysisstability analysissteady statesgrowing pointsbudsmeristems

    122

    views

    39

    downloads

    0

    comments

    0

    adaptations

    5-036-HalfCarVibration-ModelingScenario
    Vibration vehicle models provide an opportunity to integrate vehicle-based vibrations into a mechanical engineering vibrations course. The project is on a multiple-degree-of-freedom (MDOF)...

    Keywords: vibrationvehiclehalf-car modelfinite element analysisshock absorberssuspension

    270

    views

    110

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search