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    OER For CURE Development BIOME 2021 Lightning Talk - YouTube
    Members of the Ciliate Genomics Consortium (CGG) formed a fall working group to brainstorm how to convert existing Course-based Undergraduate Research (CURE) curriculum modules, which have been...

    Keywords: CUREscourse-based research experiences (CUREs)STEM CUREs

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    Undergraduate Research and Microbiology Science Community (µRAMS) lighning talk BIOME Institute 2021
    The uRAMS (undergraduate Research and Microbiology Science community) was created by faculty and researchers at Colorado State University as part of our engagement with the 2021 BIOME Institute....

    Keywords: undergraduate researchcritical readingMicrobiology Educationundergraduate educationquantitative skillsScience Communicationdei

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    Lizard cold tolerance and extreme weather events: a scientist spotlight featuring Dr. Shane Campbell-Staton
    Students interpret experimental and observational data about patterns in cold tolerance in the green anole. They reflect on the experience and identity of the lead researcher based on a video...

    Keywords: climate changeNatural Selectionenvironmental variationphenotypic plasticityacclimationenvironmental conditions

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    Creating ownership through creative writing: Advice columns as term papers in an upper-level Animal Behavior course
    Poster on taking a creative writing approach to traditional term papers. Presented at the 2021 BIOME Institute.

    Keywords: writinganimal behaviorscience writing2021 BIOMEcreative writing

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    Happy Blue Baby
    This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...

    Keywords: mutationHemoglobinmolecular visualization and analysisgenetic basisPDBMolecular Case StudyMol*

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    Introduction to Data Management and Metadata using NEON aquatic macroinvertebrate data
    This lesson focuses on understanding metadata, the data about the data, using aquatic macroinvertebrate abundance and species information from a variety of NEON sampling locations.

    Keywords: data managementSpreadsheetmetadata

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    Figure of the Week (Non-major's Biology)
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

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    Some Figures of the Day for Microbiology
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown. These are some specifically for microbiology.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

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    MathBench: Biodiversity Assessment of Stream Biota
    The MathBench module, "The Case of the Missing Mountaintop" introduces students to the concept of biodiversity and measures used to quantify biodiversity and stream health. Students investigate the...

    Keywords: ecology labCommunity Ecologyenvironmental scienceconservation ecologyStream ecology

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    The ODD protocol: A review and first update
    The ‘ODD’ (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based models (ABMs).

    Keywords: agent-based modelabmstandardizationODD protocolModel descriptionModel formulationScientific communicationChapter 3model replic

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    Figure of the Day
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

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    What is Speciation, How Does It Occur, and Why Is It Important for Conservation?
    Speciation provides a framework for classifying biodiversity on Earth and is a central concept in evolutionary biology. To help undergraduate students learn about speciation, we designed a...

    Keywords: EvolutionconservationGenetic DriftSpeciationNatural SelectionBiological species conceptgene flowMorphological species conceptPhylogenetic species concept

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    Sex-specific differences in Meiosis: Real-world applications
    In traditional classrooms, students are typically presented with facts that they are asked to memorize and recall during an exam.  The rapid explosion of available scientific facts in recent...

    Keywords: meiosisReproductionAneuploidyGameteNon-disjunctionOocyteSpermTrisomy

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    An Introduction to Revealing Hidden Figures through Data Sleuthing
    In this introduction to hidden figures in natural history collections (NHCs), students will read an article that gives a unique historical perspective of museums and will then participate in a...

    Keywords: identitysocial justicenatural history collectionsAttributionBCEENETdigitizationRepresentationcourse-based undergraduate research experiences (CUREs)hidden figuresdata democratizationrestorative practice

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    2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
    I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can...

    Keywords: biologytextbooksystemsdyanmical system

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    "I Really Enjoy These Annotations:" Examining Primary Biological Literature Using Collaborative Annotation
    Critically reading and evaluating claims made in the primary literature are vital skills for the future professional and personal lives of undergraduate students. However, the formal presentation...

    Keywords: Stem cellsAdult neurogenesisCRISPR gene editing

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    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

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    Exploring Functions for Common Phage Proteins
    This resource is designed to help students better understand the functions of common structural and enzymatic phage proteins, and to relate these functions to phage structure using electron...
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    Teaching students to read, interpret, and write about scientific research: A press release assignment in a large, lower-division class
    A central skill in any science discipline is the ability to read, understand, and discuss the primary literature of the discipline. However, teaching this skill presents unique challenges within...

    Keywords: cell biologyScience Communicationscientific literacyGraduate Teaching Assistant Professional DevelopmentBiological LiteracyPrimary ResearchWriting Skills

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    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...

    Keywords: statisticsspecies interactionsQuantitative reasoninggraphsCommunity EcologyParasitologyfood webs

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