QUBES will have scheduled maintenance work beginning on Wednesday, June 26, 2024, 4pm ET/1pm PT. The platform will operate normally for most of the day, except for an extended outage period lasting no more than 4 hours. All running tool sessions will expire during the maintenance window. Please plan accordingly and we do apologize for any inconvenience. close

Text Search:
Applied Filters
    Exploring Random Mutation and Selection: Avida-Ed Lab Book Exercise 2
    An introductory activity exploring the role of random mutation in natural selection using the Avida-ED simulation.
    875

    views

    746

    downloads

    0

    comments

    0

    adaptations

    Introduction to Probability, Statistics, and Random Processes
    This site is the homepage of the textbook Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik.
    2998

    views

    963

    downloads

    0

    comments

    0

    adaptations

    EvolSeq
    An Excel worksheet that simulates the molecular evolution of DNA sequences.
    1150

    views

    227

    downloads

    0

    comments

    0

    adaptations

    Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems
    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...
    2843

    views

    413

    downloads

    0

    comments

    0

    adaptations

    Furry with a chance of evolution: Exploring genetic drift with tuco-tucos
    Genetic drift is an important mechanism of evolution, yet undergraduates often fail to understand how it leads to evolutionary change due in part to its random nature. This lesson plan describes a...
    3120

    views

    800

    downloads

    0

    comments

    0

    adaptations

    Diffusion Through a Cell Membrane
    This module introduces rates of diffusion in the context of understanding simple and facilitated diffusion through the cell membrane. It is intended for an introductory biology audience.
    927

    views

    201

    downloads

    0

    comments

    0

    adaptations

    Citations
    Published Avida-Ed article
    1025

    views

    170

    downloads

    0

    comments

    0

    adaptations

    Links to Avida-ED spreadsheets for Active LENS and BioQUEST 2018
    Avida-ED materials and resources for Active LENS and BioQUEST 2018.
    1410

    views

    1750

    downloads

    0

    comments

    0

    adaptations

    2016-Lewnard-Townsend-Climatic and evolutionary drivers of phase shifts in the plague epidemics of colonial India
    Our analysis shows that historical datasets can yield powerful insights into the transmission dynamics of reemerging disease agents with which we have limited contemporary experience to guide...
    104

    views

    40

    downloads

    0

    comments

    0

    adaptations

    Exploring Fitness and Population Change under Selection: Avida-Ed Lab Book Exercise 3
    An introductory activity exploring the process of natural selection in action using the Avida-ED simulation.
    2814

    views

    1760

    downloads

    0

    comments

    0

    adaptations

    1-027-StochasticProcesses-ModelingScenario
    We build the infinite set of first order differential equations for modeling a stochastic process, the so-called birth and death equations. We will only need to use integrating factor solution...
    181

    views

    100

    downloads

    0

    comments

    0

    adaptations

    1376

    views

    227

    downloads

    0

    comments

    0

    adaptations

    2003-Knorrenschild-Gross-Text Books on Mathematical Modeling in Biology
    Text Books on Mathematical Modeling in Biology Compiled from the Internet by Michael Knorrenschild,
    140

    views

    37

    downloads

    0

    comments

    0

    adaptations

    Application of a Bacterial Experimental Evolution System to Visualize and Teach Evolution in Action: A Course-Based Undergraduate Research Experience
    Concepts of evolution are typically taught through examples of extremely long timescales, which do not always resonate broadly. Here, we describe a course-based undergraduate research experience...
    3010

    views

    227

    downloads

    0

    comments

    0

    adaptations

    Islands as a Tool for Teaching Ecology and Evolution
    Module for Ecology & Evolution course covering island biogeography principles, The scientific process and hypothesis testing, statistical methods (t-tests, regression), and online database use...
    1407

    views

    261

    downloads

    0

    comments

    1

    adaptations

    Seed Dispersal, Mutualisms, and Communities
    In this activity, students use data from published studies to understand patterns of seed dispersal and apply these ideas to understanding the evolution of mutualisms, and how mutualistic...
    1854

    views

    605

    downloads

    0

    comments

    0

    adaptations

    Java array and random number generator, hints
    Java, UTC, Fall 2017
    1117

    views

    224

    downloads

    0

    comments

    0

    adaptations

    What is Speciation, How Does It Occur, and Why Is It Important for Conservation?
    Speciation provides a framework for classifying biodiversity on Earth and is a central concept in evolutionary biology. To help undergraduate students learn about speciation, we designed a...
    3726

    views

    1094

    downloads

    0

    comments

    0

    adaptations

    Lizard cold tolerance and extreme weather events: a scientist spotlight featuring Dr. Shane Campbell-Staton
    Students interpret experimental and observational data about patterns in cold tolerance in the green anole. They reflect on the experience and identity of the lead researcher based on a video...
    1088

    views

    670

    downloads

    0

    comments

    0

    adaptations

    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...
    2515

    views

    200

    downloads

    0

    comments

    0

    adaptations