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    Supplemental Materials for Beagle Investigations Return with Darwinian Data Manuscript
    Supplement 1 contains an example laboratory exercise for introducing the BIRDD resources. Supplement 2 contains a list of web accessible data resources to supplement the existing BIRDD resources.

    Keywords: Galapagosdata on darwins finches

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    BIOME 2024 Workshop: “But we don’t teach ecology!”
    OCELOTS modules are open-access case studies in tropical ecology that promote active learning, quantitative skills, and systems thinking. This workshop is the prelude to a Fall FMN for adapting...

    Keywords: International researchtropical biologyBIOME 2024

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    Riverbird distributions and habitat use
    Riverbirds are widespread, use diverse riparian habitats, and respond rapidly to changing conditions. Students can apply riverbird data to evaluate hypotheses about these responses, while gaining...

    Keywords: logistic regressionHabitat selectionRiver Field Studies NetworkWaterfowl raptorkingfisherheronfocal speciesmonitorriverbank

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    2015-Sebesyen-Farago-Invasive Species Model with Linear Rat Harvesting on Easter Island
    In this paper we suggest a natural modification of this model. Namely, we will investigate the case where the amount of the rats is decreased due to some external factor, e.g., exterminations by...

    Keywords: carrying capacityharvestEaster Islandinvasie especiesratsRoughgarden theorem.

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    Using Grassy Narrows in a Live Classroom with Clicker Questions and Interactive Histogram: Sampling Distributions, Probability, and Hypothesis Testing
    Students are introduced to concepts of sampling distributions, p-values, and hypothesis testing. Using both simulated and real data for methylmercury level in fish populations, students will...

    Keywords: statisticsmathematicsbiostatisticsecologybiologygraphingp-valuest-testshypothesis testingin-class activityZoologymercury biogeochemistrybiostatistics - generalfish populationqbccBiogeochemical cyclesInterpret graphsConcepts in StatisticsElementary Hypothesis TestingMethylmercurydamsBioaccumulationtraditional dietsmercurymercury poisoningnative peopleindigenous populationCanadahydroelectricexplaining statisticsusing statisticsMake probability calculations

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    Ripped from the Headlines! Creating Case Studies from Primary Literature.
    Poster on using case studies developed from primary literature presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: case studyprimary literatureSummer Workshop 2018

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    REMNet: Online Resources 5.3.19
    Video on online resources for studying microbiomes from the Research Experiences in Microbiomes Network

    Keywords: VideoMicrobiology EducationmicrobiomesMicrobiome researchresearch in the classroomREMNet

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    Translating Co-Translational Translocation
    Understanding the process of proteins targeting to specific locations within a cell is a fundamental part of cell biology. Synthesis of proteins by co-translational translocation, which also...

    Keywords: Topologyco-translational translocationendoplasmic reticulumprotease protection assaysecretory proteinssignal sequencetransmembrane proteins

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    How Many Squirrels Are in the Shrubs? A Lesson Plan for Comparing Methods for Population Estimation
    Estimating the population sizes of animals is a key skill for any student interested in ecology, conservation, or management. However, counting animals in natural habitats is difficult, and the...

    Keywords: population ecologywildlife managementpopulation estimationsciuridaeSquirrel-Net

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    2011-Mandal-EtAl-Mathematical models of malaria
    The first aim of this article is to develop, starting from the basic models, a hierarchical structure of a range of deterministic models of different levels of complexity. The second is to...

    Keywords: epidemiologytransmissionhost-parasitemalariaRoss model

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    Gotcha! Which fly trap is the best? An introduction to experimental data collection and analysis
    Collecting data from experimental observations is an important component of the scientific process; likewise, the analysis of the data is essential to understanding the observed trends and patterns...

    Keywords: data analysisexperimental designdata collectionfruit fliesfly traps

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    DIGging Into Data and getting the credit
    Presentation on using and adapting OER data-centric resources

    Keywords: data2019 QUBES/BioQUEST Summer Workshopdata-centric teachingoer life cycle

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    My Fish Tank: An Active Learning Activity for Bacterial Nitrogen Metabolism
    This active learning activity introduces students to the second part of the nitrogen cycle, nitrification. In terrestrial and aquatic environments, bacteria from the Nitrosomonas and Nitrobacter...

    Keywords: nitrogen cyclenitrificationnitrifying bacteria

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    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    Next-generation sequencing is radically changing the study of biology, but there are currently few resources aimed at teaching the required laboratory and data-analysis skills to undergraduate...

    Keywords: statisticsbioinformaticsRNAseqgene expressioncomputer programming

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    How to Design a Classroom Activity that Integrates 3D Print Models with Active Learning
    Student exploration of relevant physical models can deepen knowledge of course material. In this guide we describe a method by which instructors can integrate 3D printing technology with an...

    Keywords: active learning3D print modelsclassroom jigsaw

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    Understanding the Quantitative and Computational Skills of Incoming Biology Students
    Presentation given as part of a Minisymposium at BEER 2015.

    Keywords: assessmentBioSQuaRE

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    Squirreling from Afar: Adapting Squirrel-Net Modules for Remote Teaching and Learning
    The shift from face-to-face instruction to remote teaching and learning has proven to be a challenging endeavor for many reasons, including lack of time, resources, and inspiration. Lab courses,...

    Keywords: online learningbehavioral ecologyCUREsRemote teachingfield ecologySquirrelSquirrel-Net

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    Learning How to Make “Good Enough” Estimations
    The ability to estimate physical quantities is a useful skill that can help develop critical thinking and scientific literacy. This lesson provides an accessible way to teach students how to...

    Keywords: MeasurementestimationcommunicationProblem Solvinggroup workUnit conversion

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    Incubators: Building community networks and developing open educational resources to integrate bioinformatics into life sciences education
    To efficiently and effectively integrate bioinformatics instruction into undergraduate life science curricula, educators would benefit from open access, high-quality learning resources (LRs) for...

    Keywords: bioinformaticsNIBLSEincubatorsLife Science

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    Wikipedia in the Science Classroom
    Despite research suggesting that writing-to-learn exercises (WTL) in the classroom are associated with increased student learning, WTL is still not widely implemented in science courses. To provide...

    Keywords: scientific writingcritical evaluationWikipediawriting for general public

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