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    Invasion, Restoration, and Response: Assessing changes in arthropod community assemblage using both parametric and non-parametric approaches
    This lesson, which is based around a recently published paper in the Journal of Ecological Applications, introduces students to both parametric and non-parametric approaches to statistical analysis...

    Keywords: ecologyANOVAInvasive Speciesspecies diversityquantitative analysisupper level wetland ecologysalt marshesarthropodsShannon diversity indexleast significant differences

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    Vegetation Greening: A Snapshot from the Andean Tropics
    This online module explores how satellite images are used to study vegetation greenness and, using Ecuador as an example, demonstrates how tropical vegetation experienced increased greenness...

    Keywords: remote sensingTime Series AnalysisEarth ObservationEarth and Space SciencesgeographyGIMMS NDVIgreening and browningtropical Andes

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    UNIDE - The Undergraduate Network for Increasing Diversity of Ecologists (RCN-UBE Introduction)
    We aim to build a sustainable network of ecologists, educators, social scientists, and students who are committed to identifying and remedying cultural and social barriers that reduce human...

    Keywords: RCN-UBE Introduction

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    2015-Sebesyen-Farago-Invasive Species Model with Linear Rat Harvesting on Easter Island
    In this paper we suggest a natural modification of this model. Namely, we will investigate the case where the amount of the rats is decreased due to some external factor, e.g., exterminations by...

    Keywords: carrying capacityharvestEaster Islandinvasie especiesratsRoughgarden theorem.

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    2011-Nancy_Rodrıguez-Applied Partial Differential Equations in Crime Modeling and Biological Aggregation
    In the first part we study a fully-parabolic system of PDEs for residential burglary ‘hotspots’ (spatio-temporal areas of high density of crime). In this work we are concerned with the existence...

    Keywords: biologyDiffusionKeller-Segel modelchemotaxiscrime

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    Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes
    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    Keywords: biologydatabaseImmunologydata sciencebioinformaticsBiotechnologyt-cellengineeringantibodyBioengineeringAntibody EngineeringlymphocytesProteinNetChopepitopeIEDBB-cellProteasomeProteasomal Cleavage

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    5-090-SolidParticleErosion-ModelingScenario
    By applying Newton's second law, and making a collection of reasonable assumptions, students will derive a system of differential equations that model the path of a rigid particle as it gouges...

    Keywords: classical mechanicssolid mechanicsNewton's Laws of Motionrigid bodyplasticitypittingductile surface

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    Bioimage Informatics Activity
    Students use basic bioimage informatics techniques to acquire quantitative data from images of cultured cells and test a hypothesis about the effect of a genetic mutation on cellular phenotypes

    Keywords: geneticsResources @ HHMI - BioInteractivegenomicscancergenetic basis of diseasebiology of cells

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    Linking Intermediate Disturbance Hypothesis to Traditional Ecological Knowledge and Conservation
    Traditional Ecological Knowledge is based on deep understanding of systems from observations made over hundreds to thousands of years. This resource connects Traditional Ecological Knowledge to...

    Keywords: climate changeenvironmental justiceintermediate disturbance hypothesisTraditional ecological knowledge

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    The Magic of Doctopus: A quick and easy way to deliver pre-named, pre-shared Google documents directly to your students’ Google drive
    Cloud-based applications, such as Google Docs, enable authors to collaboratively write and edit documents, spreadsheets, and other products.  Such collaborations can provide powerful learning...

    Keywords: metacognitiontechnologyGoogle Doc

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    Using Aquatic Macroinvertebrates in Stream Bioassessment
    Bioassessment is an evaluation of the biological condition of a waterbody using biological surveys and other direct measurements of resident living organisms. Aquatic macroinvertebrates are...

    Keywords: toleranceMacroinvertebratesRiver Field Studies Networkbioindicatorbioassessmentstream health

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    3d Naturalists - Bioblitzes, Citizen Science, and Undergraduate Learning (RCN-UBE Introduction)
    Citizen science and the associated new technological ability to crowdsource data may be the gateway for engaging the public in the science needed for the management, protection, and stewardship of...

    Keywords: RCN-UBE Introduction

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    Adaptation of Environmental Pollution & Public Health for Water and Emerging Contaminants (Project EDDIE)
    Environmental health is a field of study within public health that is concerned with human-environment interactions, and specifically, how the environment influences public well-being. In this...

    Keywords: public healthProject EDDIEwater qualitypollutionpfas

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    The Edge Effect
    This module has students venturing outdoors to take a 50m transect and collect abundance data on plants utilizing quadrats in both edge and interior environment. Mathematically the goals of this...

    Keywords: statisticsecologydata analysisExcelintroductory biologygraphingp-valuest-testsQuantitative reasoninghypothesis testingsample sizestatistical testsinterdisciplinarystatistical analysisCommunity Ecologyspecies diversityvariationdiversity indexvinterpret dataNIQBShannon diversity indexC3. Statistical AnalysisC6. Quantitative Languageedge effect

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    2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
    I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can...

    Keywords: biologytextbooksystemsdyanmical system

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    Workshop Report: Summer 2020 Virtual CRISPR in the Classroom
    As innovations and developments in genome editing technologies using CRISPR-Cas systems progress, the need to disseminate relevant knowledge and build skills among the next generation of young...

    Keywords: geneticscrisprGenome Analysisgene editingbacterial immunity

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    Casting a Wide Net via Case Studies: Educating across the undergraduate to medical school continuum in the biological sciences
    This article seeks to help bridge undergraduate and medical educators by describing shared educational goals and strategies, highlighting resources relevant for both groups, and exemplifying shared...

    Keywords: genetic testingdirect-to-consumer genetic testinginformed consentprenatal screeningsecondary findingswhole genome sequencing

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    Atlas of Black Scholarship for Inclusive and Racially Diverse STEM Curricula – Volume I
    The contributions of Black scientists to the advancement of STEM are poorly represented in course materials. Here, we provide an Atlas of Black Scholarship to help Life Sciences and Chemistry...

    Keywords: BLACK SCIENTISTS IN STEMRACIALLY-RESPONSIVE PEDAGOGYBIOLOGY AND CHEMISTRY EDUCATIONDIVERSITY IN STEM CURRICULUM

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    Exploring Microbial Diversity: An Interactive In-Class Assignment for Biology and Microbiology Courses
    This interactive assignment engages students in a hands-on exploration of microbial diversity and the importance of microbes in ecosystems. Designed for General Biology II and Introduction to...

    Keywords: Microbiology EducationMicrobial DiversitymicrobiologyEcological Society of Americaecology educationresearch-based classroom instruction4DEE Framework

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    Using Raw Sequence Data to Analyze Tumor Suppressor Mutations
    Learning to identify DNA sequence variants from raw sequencing data (electropherograms) is a basic molecular biology skill with applications to basic research and clinical practice. Yet learning to...

    Keywords: bioinformaticsmutationDNAgenomic visualizationparts of a geneclinical consequencesraw data

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