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    An Introduction to Revealing Hidden Figures through Data Sleuthing
    In this introduction to hidden figures in natural history collections (NHCs), students will read an article that gives a unique historical perspective of museums and will then participate in a...

    Keywords: identitysocial justicenatural history collectionsAttributionBCEENETdigitizationRepresentationcourse-based undergraduate research experiences (CUREs)hidden figuresdata democratizationrestorative practice

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    3d Naturalists - Bioblitzes, Citizen Science, and Undergraduate Learning (RCN-UBE Introduction)
    Citizen science and the associated new technological ability to crowdsource data may be the gateway for engaging the public in the science needed for the management, protection, and stewardship of...

    Keywords: RCN-UBE Introduction

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    Using Collaborative Projects to Promote Active Learning of Microbial Skin Diseases and Their Impact on Everyday Lives
    One of the most daunting aspects of introductory clinical microbiology is learning details about a vast number of different microbial diseases that can infect humans. Each of these diseases has...

    Keywords: infectious diseasecollaborationpathogenesisTreatment of diseasesReal-life Microbiology

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    2016-Rob_deBoer-Population Dynamics  A Graphical Approach
    This book is an introduction into modeling population dynamics in ecology. Because there are several good textbooks on this subject, the book needs a novel ecological niche to justify its existence.

    Keywords: mathematical modelstabilitycompetitionSIRbifurcationconsumptionpopulation population dynamicsgeneral replicationnonlinear density dependenciesfunctional responsepersistencephase plan analysis

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    Building Better groups in STEM Courses
    Formation of student groups that can work effectively together is challenging at best. Considerations include group size and formation (assigned or student choice) and how group members will be...

    Keywords: EquityinclusionDiversity in STEM classroomsgroup workdeidiversity equity and inclusionBIOME 2022

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    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

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    Applying phylogenetic tree building in MEGA X to forensic applications for identifying unknown specimens
    This exercise is designed to guide a learner through the construction of phylogenetic trees as a means of addressing research questions in forensic science such as the identification of previously...

    Keywords: taxonomyBioinformatics and GenomicsDNA Barcodinginvertebrate phylogeneticsforensic entomology

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    "I Really Enjoy These Annotations:" Examining Primary Biological Literature Using Collaborative Annotation
    Critically reading and evaluating claims made in the primary literature are vital skills for the future professional and personal lives of undergraduate students. However, the formal presentation...

    Keywords: Stem cellsAdult neurogenesisCRISPR gene editing

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    Interpreting the Pseudocot Phylogeny
    Students use physical characteristics, genetics, and a fossil record of hypothetical flowering plants to develop fundamental phylogenetic tree-building skills.
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    Understanding Restriction Enzyme Digests
    Prior to submitting genomic DNA for sequencing, SEA students perform a restriction endonuclease digest with several enzymes, which provides a fast and cost-effective way of quickly screening...
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    How to Design a Classroom Activity that Integrates 3D Print Models with Active Learning
    Student exploration of relevant physical models can deepen knowledge of course material. In this guide we describe a method by which instructors can integrate 3D printing technology with an...

    Keywords: active learning3D print modelsclassroom jigsaw

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    Data Management in Excel and R using National Ecological Observatory Network's (NEON) Small Mammal Data
    Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by re-organising excel sheets...

    Keywords: codingR Markdowndata managementggplot2spreadsheetssmall mammals community dynamicsNEONResource TypeNational Ecological Observatory NetworkR softwaredplyr

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    Exploring Functions for Common Phage Proteins
    This resource is designed to help students better understand the functions of common structural and enzymatic phage proteins, and to relate these functions to phage structure using electron...
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    The ml4bio Workshop: Machine Learning Literacy for Biologists
    Presentation on machine learning literacy for biologists at the 2019 Great Lakes Bioinformatics Conference

    Keywords: bioinformaticsmachine learning

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    Data Management using National Ecological Observatory Network's (NEON) Small Mammal Data with Accompanying Lesson on Mark Recapture Analysis
    Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by estimating small mammal...

    Keywords: data managementspreadsheetssmall mammals community dynamicsNEONCapture mark-recaptureResource TypeNational Ecological Observatory Network

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    Environmental Drivers of Ecosystem Carbon Fluxes from Minutes to Years
    Students build on fundamental concepts of ecosystem production and carbon cycling, combining this knowledge with open long-term data from ecological and meteorological networks to uncover the...

    Keywords: climate changecarbonPlant EcologyBiogeochemistryResource Typecarbon cyclingproductivitynet ecosystem productiongross primary productionecosystem respirationcarbon fluxes

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    An Interrupted Case Study on Urban Prairie Restoration
    Engaging students in meaningful discussions can be a challenging task for science instructors, especially in introductory courses. The story-telling approach used in case studies can increase...

    Keywords: urban ecologyPrescribed fireEcosystem Servicesecological restorationwoody encroachmentrangeland ecology

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    Engaging Undergraduates in Mechanisms of Tubular Reabsorption and Secretion in the Mammalian Kidney
    If students fail to see the connections among physiological systems, they can become overwhelmed with the amount of information they need to learn. Some students have particular difficulty with the...

    Keywords: OsmosisActive transportMass flowRenal reabsorptionRenal secretionTransport across membranes

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    Data Analysis Recitation Activities Support Better Understanding in SEA-PHAGES CURE
    Course-based undergraduate research experiences (CUREs) are widely known to improve student learning outcomes in the sciences. Undergraduate students have a particularly difficult time interpreting...

    Keywords: bacteriophageDNA extractionGel analysisPhage purificationTiter calculationViral replicative growth

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    Mice, Acorns, and Lyme Disease: a Case Study to Teach the Ecology of Emerging Infectious Diseases.
    Ebola, Zika, the recall of contaminated lettuce - these are just a few recent outbreaks making headlines. Students should be able to connect what they learn in their biology courses to explain...

    Keywords: epidemiologyEcological changeInfectious disease ecologyReservoirsTransmission cycle

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