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    HSI - Student Research Journal - Vol.2 Issue 1 - Spring 2021
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 2 - Issue 1 - Spring 2021...

    Keywords: scientific methodscience education

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    HSI - Student Research Journal - Vol.1 Issue 4 - Fall 2020
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 1 - Issue 4 - Fall 2020...

    Keywords: scientific methodscience education

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    HSI - Student Research Journal - Vol.1 Issue 2 - Fall 2020 v.1.0
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 1 - Issue 2 - Fall 2020...

    Keywords: scientific methodscience education

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    Hypoxia: A Case Study in R
    Aquatic ecosystems are home to a complex intersection of physical and biological factors and an intersection of natural and anthropogenic factors. In the Chesapeake Bay, low oxygen events have...

    Keywords: data analysisOceanographyProject EDDIE

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    Ocean Acidification: Predator-Prey Interactions of Intertidal Snails and Sea Stars
    This lesson discusses ocean acidification, its causes, and the potential dangers that it may pose to aquatic ecosystems by analyzing the relationship between intertidal invertebrates. While...

    Keywords: predator-prey interactionsocean acidification

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    Scientists Offering Solutions through Sprints
    Our BIOME Fall Working Group, Scientists Offering Solutions through Sprints, explains the process of putting together a Science sprint in your community. A science sprint is a one-day event in...

    Keywords: collaborationengagementScience Sprints

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    Investigating human impacts on Southeastern US stream ecology using R
    Adaptation of the "Investigating human impacts on stream ecology: Scaling up from Local to National with a focus on the Southeast" specifically to focus on self-paced R code instruction
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    A Changing Climate in the Hawaiian Wet Forest: In-Person and Virtual Curriculum for Field Courses at Puʻu Makaʻala NAR
    Curriculum for Puʻu Makaʻala Huakaʻi with the National Ecological Observatory Network (NEON), developed by Teaching Change. This module was created to guide Teaching Change Field Courses at Puʻu...

    Keywords: climate changecommunityenvironmental sciencephenologyhuman-environmental interactionsNEONhawai'icareer connected

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    Scientist Spotlights and Data Nuggets Workshop Materials (BIOME 2021)
    Materials and resources for the "Scientist Spotlights and Data Nuggets Workshop," presented at the 2021 Biology and Mathematics Educators (BIOME) Institute.

    Keywords: data literacyDiversity in STEM classroomsonline professional development

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    Examining Medical and Scientific Racism Using the Story of Henrietta Lacks
    This is a semester-long project in which students read and discuss the story of Henrietta Lacks from multiple ethical perspectives. This project was developed for an undergraduate science ethics...

    Keywords: diversity equity and inclusiondecolonizing scienceanti-racist pedagogy

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    Inquiry-based hypothesis testing using phylogenetic trees in MEGA
    A key learning objective in biology is applying bioinformatics tools to test a real-life question. These inquiry-based modules have students assemble and align data, and construct simple...

    Keywords: phylogeneticsbioinformaticsFASTANCBIBLASTmultiple sequence alignmentsequence similarityCourseSourceZika virusMEGAalcohol metabolism

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    Case Study — The Gender gap in 100-meter dash times
    In 2004, the journal Nature published a short tongue-in-cheek paper by Tatem and colleagues meant to critique common abuses in linear modeling while fitting data from the Olympic gold medal times...

    Keywords: calling bulltrack and fieldreproducing resultslinear modelingcritique

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    Traditional Ecological Knowledge and Natural History
    In this module, students will explore Western Science and Traditional Ecological Knowledge and review a case study of how the TEK of the Inuit provided a way of knowing and understanding the...

    Keywords: Traditional ecological knowledgeUnderstanding ScienceBowhead Whale

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    Single Factor Analysis of Variance (ANOVA)
    This swirl lesson introduces students to theoretical and practical concepts about single-factor ANOVA analysis and an approach to conduct this type of analysis using R.

    Keywords: ANOVATukey HSD

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    Making Predictions with Linear Models: A Murder Mystery Case Study
    This Swirl lesson will introduce two main concepts to students: 1) the idea of uncertainty around linear slopes versus individual values and 2) predicting values using linear models.

    Keywords: data visualizationlinear modelscase study teachinguncertaintypredictionConfidence intervals

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    Introductory Video and worksheets on Module 1 and 2 on "Sequence Similarity: An inquiry based and under the hood..."
    The video walks the students to complete Module 1 and 2 on Sequence Similarly and Alignment adapted from Tapprich (2019) and Hudson Alpha that teaches these modules within the context of the...

    Keywords: bioinformaticssequencingFASTANCBINIBLSEalgorithmsBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixCourseSource

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    Oyster Restoration Success and Water Quality in the James and Rappahannock Rivers of Virginia
    This QUBES lesson uses statistical analysis to test whether or not oyster restoration sites in Virginia are successfully increasing the number of oysters and whether or not water quality is...

    Keywords: aquatic ecologymarine ecologyggplot2Pearson correlation coefficientSimple Linear RegressionnitrogenJames Rivertidyversechesapeake baywater qualityphosphorusharmful algae bloomsvirginia

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    Exploring global reef health and human population using correlation and simple linear regression
    In this lesson, students will explore the relationship between reef cover and human disturbance. Students will manipulate a large dataset and perform normality tests, data transformations,...

    Keywords: population dynamicshumanlinear regressionconservationcorrelationRestorationcoral reefs

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    Remote Sensing of Plants and Topography in R (Project EDDIE)
    Students will explore different possible abiotic drivers of plant growth, defined as greenness and height. In the final step, students will analyze data from around the United States and consider...
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    Regression: Tree Rings and Measuring Things
    Students develop scatter plots of growth rings by tree diameters and determine the equation of their best fit line.

    Keywords: NIMBiosregressiontree ringsline of best fit

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