You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    BSL-4: Authorized Personnel Only
    National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection

    Keywords: infectious diseaseexperimental designbioinformaticsEbolaNIBLSECase It!PCRBLASTmultiple sequence alignmentPublished in National Center for Case Study Teaching in Sciencepolymerase chain reactionfebrile illnessvirusELISAenzyme linked immunosorbent assayfilovirusAfrica

    1127

    views

    211

    downloads

    0

    comments

    0

    adaptations

    2020-Ciaroshi-How_COVID-19_Spreads_MathModels
    On December 31, 2019, the Chinese city of Wuhan reported an outbreak of a novel coronavirus (COVID-19) that has since killed over 4,200 people. As of March 11, 2020, over 118,000 infections—have...

    Keywords: diseasecovidoutbreakWuhancoronoavirus

    145

    views

    38

    downloads

    0

    comments

    0

    adaptations

    Obesity - An Epidemic with Unexpected Causes, Consequences, and Complexity
    This dataset was collected from interviews conducted by the Centers for Disease Control and Prevention. State by state data are provided to explore the interactions of education, income, and...

    Keywords: ObesitySocioeconomic StatusFood SwampFood Desert

    1046

    views

    647

    downloads

    0

    comments

    0

    adaptations

    Mosquito Vector Ecology of the East Coast using NEON
    This data module examines the relationship between mosquito vector ecology and climate across the east coast of the United States. The module is designed to merge core concepts in ecology with...
    1448

    views

    3669

    downloads

    0

    comments

    0

    adaptations

    Figure of the Day: Disease version
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown. Forked version with all infectious disease graphs.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

    1179

    views

    270

    downloads

    0

    comments

    0

    adaptations

    Sin Nombre Hantavirus in the US
    A module guiding students through the review of different biodiversity data sources to identify patterns in the distribution of the Sin Nombre Hantavirus in the United States. English, Spanish, and...

    Keywords: Resources @ AIM-UP!infectious diseasespublic healthnatural history collectionsWildlife Diseasedigitized natural history collectionsenglishSpanishzoonotic diseaseshantavirusMEPAPortuguesetranslated

    632

    views

    338

    downloads

    0

    comments

    0

    adaptations

    Parasite Travel Game
    Board game where travellers go around the world trying to avoid developing parasitic infections.

    Keywords: parasitesParasitologytravelBoard gameParasitic Disease

    299

    views

    179

    downloads

    0

    comments

    0

    adaptations

    A Potential Novel Ecosystem Service: Seagrass Meadows Reduce Disease in Nearby Corals
    In this lesson, students will receive an introduction to Poisson Generalized Linear Mixed Models in R utilizing data on coral diseases. In their code, students will assess if seagrass status has an...

    Keywords: environmental scienceseagrassecosystemcoral reefsEcosystem Services

    526

    views

    460

    downloads

    0

    comments

    0

    adaptations

    Sequence Similarity in Developmental Biology - A Bioinformatics Exercise Using Myostatin
    This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of...
    1239

    views

    2266

    downloads

    0

    comments

    0

    adaptations

    1-104A-T-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions and comparing to actual...

    Keywords: regressioninfectionCOVID19carrying capacitylogistic equationexponential model

    469

    views

    171

    downloads

    0

    comments

    0

    adaptations

    2016-Wilkie-EtAl-Using ODEs to Explore Cancer-Immune Dynamics and Tumor Dormancy
    Here we present a general method using ordinary differential equations (ODEs) to model and analyze cancer-immune interactions, and in particular, immune-induced tumor dormancy.

    Keywords: cancertumor-inhibiting cytotoxic actiontumor-promoting inflammationimmune-induced tumor dormancytumor growth dynamics

    135

    views

    47

    downloads

    0

    comments

    0

    adaptations

    2019-Fred_Brauer-The_Final_Size_of_a_Serious_Epidemic
    In an epidemic of a serious disease, there is likely to be behavioral response that decreases the epidemic size considerably.

    Keywords: epidemicfinal sizebehavioral responseSIER modelrelations

    87

    views

    30

    downloads

    0

    comments

    0

    adaptations

    Studying disease with Dr. Ameeta Parekh of the FDA
    Ameeta Parekh, Ph.D. is the Senior Advisor for Scientific Collaborations in the Office of Translational Sciences for the FDA. She talked to us about the FDA's mission and purpose, an overview of...

    Keywords: diseasedrugsregulatory complianceFDA

    369

    views

    70

    downloads

    0

    comments

    0

    adaptations

    Machine Learning Meets Medicine with Jenessa Peterson
    Jenessa Peterson is a former teacher turned data scientist/engineer and Director of Learning Engineering at The Learning Agency. Her more recent work in data science has included building a...

    Keywords: data sciencemachine learningmedicine

    385

    views

    80

    downloads

    0

    comments

    0

    adaptations

    6-010-SocialCampaign-ModelingScenario
    The epidemic modeling problem is formulated as a system of three nonlinear, first order differential equations in which three compartments (S, I, and R) of the population are linked.

    Keywords: diseasegrowth rateJudgment and Decision MakingSIR modelinfections diseasesocial campaignrecovery ratedelay timejoining processquitting processexponential distribution

    167

    views

    97

    downloads

    0

    comments

    0

    adaptations

    6-016-PandemicModeling-ModelingScenario
    The recent coronavirus outbreak has infected millions of people worldwide and spread to over 200 countries. How can we use differential equations to study the spread of coronavirus?

    Keywords: population dynamicsinfectious diseasediseaseEbolaeSIR modelsCOVID19pandemicepidemicreproduction number

    264

    views

    353

    downloads

    0

    comments

    0

    adaptations

    The Human Microbiome Biodiversity in Health and Disease
    The students will analyze the human gut and vaginal microbiomes in healthy and diseased states using diversity of bacteria as determined by 16SrRNA sequence.
    1039

    views

    694

    downloads

    0

    comments

    0

    adaptations

    Cancer Discovery Activities
    These two hands-on activities are based on a Howard Hughes Medical Institute 2013 Holiday Lectures on Science video (http://www.hhmi.org/biointeractive/cancer-genetic-disease-video-highlights)...

    Keywords: geneticsResources @ HHMI - BioInteractiveorganismal biologyneurosciencegenomicscancergenetic basis of diseasebiology of cellsHigh School

    1815

    views

    315

    downloads

    0

    comments

    2

    adaptations

    Disease Spread Simulation with M&M's and Information on the wider SIMIODE community
    This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at www.simiode.org

    Keywords: resourcesdifferential equationsmodelingsimulationmoduledataepidemicsdiseasecommunityapplied mathematicsResources @ SIMIODEretinal surgeryinsect colonyLSDm&mparameter estimationin-class activityproject

    1726

    views

    826

    downloads

    0

    comments

    0

    adaptations

    Role of Crop Genetic Diversity on Pathogen Impact: The Tale of Two Pathogens
    Introductory genetics courses are part of the core curriculum in many different fields, including plant breeding, animal science, biology, microbiology, and natural resource management. Concepts...

    Keywords: plant pathologygenetic diversityDisease TriangleModes of Reproduction

    2489

    views

    215

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search