You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Biobyte 4 - The role of data science principles and practices in undergraduate biology
    This short activity was an effort to launch a community conversation around the interface of data science principles and practices and undergraduate biology education. A variety of resources,...

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

    1027

    views

    570

    downloads

    0

    comments

    0

    adaptations

    DIGging Into Data and getting the credit
    Presentation on using and adapting OER data-centric resources

    Keywords: data2019 QUBES/BioQUEST Summer Workshopdata-centric teachingoer life cycle

    1588

    views

    346

    downloads

    0

    comments

    0

    adaptations

    Using Digitized Collections-Based Data in Research: A Hands-On Crash Course in Ecological Niche Modeling
    Step-by-step, hands-on instruction on ways to access and download these specimen data, how to process climate layer data, and how to apply Maxent software to construct ecological niche models.

    Keywords: ecology labbiodiversity informaticsnatural history collectionsMicrosoft Excelbiodiversity collectionsRstatsecological niche modelingQGISENMToolsMaxent

    1993

    views

    581

    downloads

    0

    comments

    0

    adaptations

    Teaching Data Viz and Communication as an Undergraduate Biology Course: Syllabus and Resources
    Teaching materials co-developed for a new upper-level undergraduate biology course to teach data exploration and communication without requiring previous coding experience.

    Keywords: data visualizationR programming languagedata literacycalling bulldata viztidy data

    1460

    views

    525

    downloads

    0

    comments

    0

    adaptations

    MS Excel Refresher - Lizards, iguanas, and snakes! Oh my! | Data Nuggets
    This resource, a MS Excel refresher, extends the level for this Data Nugget. Students are given an Excel workbook with the data and asked to graph and calculate diversity using Excel functions...

    Keywords: Resources @ Data NuggetsspreadsheetsRestoration EcologyUsing Excelgraphing in Excelformulas in ExcelApplied ecology

    565

    views

    300

    downloads

    0

    comments

    0

    adaptations

    1-018-LogisticPopModel-ModelingScenario
    We offer artificial (toy) and historical data on limited growth population situations in the study of protozoa and lead students through several approaches to estimating parameters and determining...

    Keywords: data analysisparameter estimationlogisticCiliate protozoapopulationlimited growthparameciaGause

    261

    views

    29

    downloads

    0

    comments

    0

    adaptations

    Morphological and Molecular Analysis of Plant Phylogeny and Diversity
    In this lab, students perform phylogenetic analyses on morphological and molecular data, and compare.

    Keywords: morphologyphylogenylaboratoryplantsdiversitymolecular analysis

    1256

    views

    454

    downloads

    0

    comments

    0

    adaptations

    Ferns are Everywhere
    Using spatial fern population data in hypothesis testing

    Keywords: hypothesis testingNumbers Countspatial distribution

    1178

    views

    249

    downloads

    0

    comments

    0

    adaptations

    Earth Analytics in Python Course
    Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...

    Keywords: data analysisdatadata typesdata scienceearth sciencepythonpermafrostremote sensingfloodsGeographic Information System (GIS)data science educationcomputer programmingwildfireearth analytics

    1901

    views

    404

    downloads

    0

    comments

    0

    adaptations

    Morphological and Molecular Analysis of Plant Phylogeny and Diversity
    In this lab, students perform phylogenetic analyses on morphological and molecular data, and compare.

    Keywords: morphologyphylogenylaboratoryplantsmolecular analysis

    2048

    views

    425

    downloads

    0

    comments

    4

    adaptations

    Using primary literature to teach data literacy
    Presentation by Bridget Conneely made as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of American...

    Keywords: Ecological Society of America

    1278

    views

    365

    downloads

    0

    comments

    0

    adaptations

    Tools: New tools for new science
    A collection of computational, modeling and data analysis tools developed at Microsoft Research Labs.

    Keywords: modelingdata analysisdatacomputational toolsdata visualization

    961

    views

    196

    downloads

    0

    comments

    0

    adaptations

    1-031-CoolIt-ModelingScenario
    We offer data on the temperature of water in a beaker in a room of constant temperature and in a room of nonconstant temperature. Students consider both empirical and analytic modeling...

    Keywords: SpanishNewton's Law of Coolingcooling

    232

    views

    293

    downloads

    0

    comments

    0

    adaptations

    Data simulation and randomization tests
    A participatory live-coding lesson on simulating data and performing randomization tests on ecological data in R.
    1649

    views

    1501

    downloads

    0

    comments

    0

    adaptations

    REMNet Tutorial, R Part 2: Importing Your Microbiome Data into R 5.3.19
    Video on importing data into R from the Research Experiences in Microbiomes Network

    Keywords: growth mindsetVideoMicrobiology EducationR programming languagemicrobiomesmath attitudesResources @ BIOMAAPmistakesvalue of mistakesresearch in the classroomREMNeturban microbiomes

    1235

    views

    440

    downloads

    0

    comments

    0

    adaptations

    Identifiers in Digital Natural History Collections
    This is a collection of resources focusing on GUIDs (Globally Unique Identifiers) on what they are, what role they play in digital natural history collections, and how to incorporate them in...

    Keywords: idigbioStudy guidedata managementnatural history collectionsBLUEdigitized natural history collectionsidentifiers

    373

    views

    257

    downloads

    0

    comments

    0

    adaptations

    3-016-FallingCoffeeFilters-ModelingScenario
    We are given data on the time and position of a stack of coffee filters as it falls to the ground. We attempt to model the falling mass and we confront the different resistance terms and models.

    Keywords: resistanceFree Body Diagramcoffee filterforcegraviityfalling object

    952

    views

    1433

    downloads

    0

    comments

    0

    adaptations

    Data on Dead Zones and a Scientist Spotlight Featuring Benjamin Negrete, Jr.
    In this lesson, students plot data and interpret graphs of the metabolic responses of fish to hypoxic conditions. Then, students view and reflect on an interview with fish ecophysiologist Benjamin...

    Keywords: fishgraphinggraph interpretationhuman-environmental interactionsdata literacysocial justicemarineCODAP

    4009

    views

    3186

    downloads

    0

    comments

    0

    adaptations

    Prioritizing your Data Science Curriculum
    This is the summary powerpoint of the Monday session at the BioQUEST / QUBES 2019 Summer Workshop including the description of the student data project on height change overnight.

    Keywords: data scienceOER2019 QUBES/BioQUEST Summer Workshopdata science educationNASEM

    1194

    views

    259

    downloads

    0

    comments

    0

    adaptations

    6-001-Epidemic-ModelingScenario
    This paper presents real-world data, a problem statement, and discussion of a common approach to modeling that data, including student responses. In particular, we provide time-series data on the...

    Keywords: datadifference equationsparameter estimationcontinuousepidemicdiscreteboarding school

    595

    views

    519

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search