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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    DataONE Module 03: Data Management Planning
    Benefits of a data management plan (DMP), DMP components, tools for creating a DMP, NSF DMP information, and a sample DMP.

    Keywords: moduledatain-class activityHandoutproblem setdata managementDataONEPresentation

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    Introduction to Mathematical Modeling in Biotechnology, Cell Biology, and Physiology
    The course is a mathematical and computational exploration of five diverse areas of biology: human locomotion, gene sequence analysis, signal transduction pathways involved in cancer,...

    Keywords: mathematical modelingcoursehuman locomotionneuroanatomyneurophysiologysignal transductiongene sequence analysis

    939

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    Tools: New tools for new science
    A collection of computational, modeling and data analysis tools developed at Microsoft Research Labs.

    Keywords: modelingdata analysisdatacomputational toolsdata visualization

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    Citations
    Published Avida-Ed article

    Keywords: EvolutioncurriculumSelectionDigital Organisms

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    Avida-ED
    Avida-ED is an award-winning educational application developed at Michigan State University for undergraduate biology courses to help students learn about evolution and scientific method.

    Keywords: simulationEvolutionbiologyscientific methodResources @ QUBES - Softwaredigitalhypotheses

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    Natural History Collections as Emerging Resources for Innovative Education
    Natural history collections have the potential to help transform undergraduate science education from passive learning into an active exploration of the natural world.

    Keywords: educationnatural historycollectionsdigital resourcesResources @ QUBES - Teaching & Reference

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    Data from: Advancing population ecology with integral projection models: a practical guide
    Review important resources for building IPMs and provide a comprehensive guide, with extensive R code, for their construction.

    Keywords: IPMintegral projection modelsdemographyelasticitylife historymatrix projection modelpopulation growth ratepopulation projection modelsensitivitystage structurevital ratesResources @ DryadResources @ QUBES - Data

    1006

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    An Introduction to agent-based modeling.
    Introductory level textbook based on a collection of lecture notes from an undergraduate course on agent-based modeling at Arizona State University.

    Keywords: textbookcurriculumNetLogoagent-based modelingIndividual & Agent Based Modelingcourseundergraduate educationResources @ QUBES - Teaching & Reference

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    Advancing population ecology with integral projection models: a practical guide
    Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to make population projections using regression...

    Keywords: IPMintegral projection modelspopulation growthreviewsdemographyelasticitylife historymatrix projection modelpopulation growth ratesensitivitystage structurevital ratesregressionResources @ QUBES - Teaching & Referencecovariatesanalytics

    910

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    Documenting teaching scholarship among undergraduate biology educators using OER
    Poster on the use, adaptation, and reuse of Open Educational Resources within the QUBES community at OpenEd 2018

    Keywords: QUBESadaptationfmnOpenEdteaching scholarship

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    Use of Peerwise and Twitter in Open Pedagogy
    This presentation will demonstrate the use of two open tools (Peerwise and Twitter) to engage students in creating and discussing course content.

    Keywords: twitterOER

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    Augmented Reality Metabolic Pathways (ARMET)
    The ARMET app is developed using Unity, 3D molecules obtained from Protein Data Bank and ChemSpider-chemical structure database, the usage data are stored into a database (MySQL) and are analyzed...

    Keywords: BiochemistryAugmented RealityMetabolic Pathways

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    Birthday Problem and Class Phenotypic Probabilities
    An Excel workbook exploring two related applications, the Birthday Problem and Class Phenotypic Probabilities. Students enter their own phenotypes into the workbook.

    Keywords: ExcelResources @ ESTEEMphenotypic probabilityallelic frequency

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    Geology
    In this video, we discuss how studying the rocks and minerals around us can tell us about the history of the planet. We also discuss what makes a scientific law and how those laws are applied in...

    Keywords: videosgeologyScience Forwardproxiesscientific law

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    Tools of Seeing
    This video really focuses on having a sense of scale, a Number Sense skill. We talk to astronomers, biologists, and geologists about how they use tools to enhance their sight and how this allows...

    Keywords: videosnumber sensescaleunit conversionsScience Forwardorders of magnitude

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    Beanbag Toss (Grades 6-8)
    The classroom lesson presents students with the task of developing a fair--yet challenging--beanbag toss game.

    Keywords: parametersdata collectionMeanMedian & Mode

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    Beanbag Toss (Grades 3-5)
    The classroom lesson presents students with the task of developing a fair--yet challenging--beanbag toss game.
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    Beanbag Toss (Grades K-2)
    The classroom lesson presents students with the task of developing a fair--yet challenging--beanbag toss game.
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    Emergency Water Supply (Grades 6-8)
    This classroom lesson presents students with the task of determining how much water their school would to store in case of an emergency disaster.
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    Design a Zoo (Grades 6-8)
    This classroom lesson presents students with the job of designing a zoo, which could include modeling tasks ranging from choosing and locating the exhibits to setting the right admission prices.
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