You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    A CURE-based approach to teaching genomics using mitochondrial genomes
    There is an abundance (currently over 1016 DNA bases) of publicly available genetic sequence data and a dearth of trained genomicists to process and interpret it, necessitating more trained...

    Keywords: proteinsMitochondrial GenomesNuclear GenomesrRNAtRNA

    1812

    views

    267

    downloads

    0

    comments

    0

    adaptations

    Serotonin in the Pocket: Non-covalent interactions and neurotransmitter binding
    This lesson introduces beginning biochemistry students to the concept of a biomolecule binding site, such as a neurotransmitter receptor site or an enzyme active site. A simple organic molecule,...

    Keywords: active sitebindingbinding sitehydrogen bondinghydrophobic effectionic interactionsnon-covalent forces

    2704

    views

    326

    downloads

    0

    comments

    0

    adaptations

    Taking the Hassle out of Hasselbalch
    Mention pH in a classroom and you can almost see the inner yawn on the faces of your students. The definition may even roll easily from their lips. However, despite multiple exposures to the...

    Keywords: pHdrug uptakeHenderson-Hasslbalch equationmedical applicationspKa

    1488

    views

    355

    downloads

    0

    comments

    0

    adaptations

    SCIENCE/Fiction: Modular Template for Class Design
    We present a modular scaffold for designing an introductory seminar using speculative fiction and science papers to welcome university undergraduates to the biology major. A list of twelve possible...

    Keywords: geneticscell biologyneurosciencesystems biologyScience Fiction

    1502

    views

    297

    downloads

    0

    comments

    0

    adaptations

    Discovery and Invention: A Reflection on Representation in Science
    Despite increased awareness of the lack of equity and inclusion in the STEMM classroom, lessons on DEI topics are treated as separate to the scientific curriculum being taught. Rarely are...

    Keywords: EquityDiversity and Inclusionantiracism

    700

    views

    76

    downloads

    0

    comments

    0

    adaptations

    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.

    Keywords: spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions

    370

    views

    81

    downloads

    0

    comments

    0

    adaptations

    Expanding the Reach of Crop Plants for Food Security: A Lesson Integrating Non-Majors Students Into the Discussion of Food Diversity and Human Nutrition
    University general education (GE) courses host students with various academic backgrounds, interests, and perspectives. Engaging students in GE classes with agricultural issues can be challenging...

    Keywords: cereal graincrop diversitycrop yieldglobal food systemhuman nutritionnutrient qualitypseudocereal grainstaple cropunderutilized crop

    1308

    views

    240

    downloads

    0

    comments

    0

    adaptations

    What is Speciation, How Does It Occur, and Why Is It Important for Conservation?
    Speciation provides a framework for classifying biodiversity on Earth and is a central concept in evolutionary biology. To help undergraduate students learn about speciation, we designed a...

    Keywords: EvolutionconservationGenetic DriftSpeciationNatural SelectionBiological species conceptgene flowMorphological species conceptPhylogenetic species concept

    3828

    views

    1109

    downloads

    0

    comments

    0

    adaptations

    To Vaccinate or Not to Vaccinate
    To vaccinate or not to vaccinate, that is the question. Much of the recent trend in society against vaccination is that the general population does not understand 1) how vaccines work and 2) how...

    Keywords: pathogenELISAimmunityantibodyAntigen

    937

    views

    149

    downloads

    0

    comments

    0

    adaptations

    A Short Bone Biomechanics Primer: Background for a Lesson on Bone Viscoelasticity
    The skeletal system is the first of the body systems that we discuss in-depth in our Physiology & Anatomy courses (PNB 2264/2265 and PNB 2274/2275) in the Department of Physiology and...

    Keywords: structure-functionbiomechanicsAnisotropyViscoelasticity

    712

    views

    108

    downloads

    0

    comments

    0

    adaptations

    The Science Behind Parthenogenesis: Interesting things happen when meiosis goes “wrong”
    Parthenogenetic reproduction is a fascinating, complex topic.  This article accompanies “Why Meiosis Matters: The case of the fatherless snake.” It summarizes the basic information...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

    1738

    views

    231

    downloads

    0

    comments

    0

    adaptations

    Using Zebrafish in a Developmental Biology Lab Course to Explore Interactions Between Development and the Environment
    Important learning outcomes for biology students include the ability to develop experiments as well as pull together concepts across their coursework. The field of developmental biology, especially...

    Keywords: toxicologymorphogenesisorganogenesis

    2321

    views

    680

    downloads

    0

    comments

    0

    adaptations

    Splicing it Together: Using Primary Data to Explore RNA Splicing and Gene Expression in Large-Lecture Introductory Biology
    At the heart of scientific ways of knowing is the systematic collection and analysis of data, which is then used to propose an explanation of how the world works. In this two-day module, students...

    Keywords: gene regulationtranscriptiongene expressioncentral dogmarepressoralternative splicingmRNA processingActivatorTranscription factors

    3303

    views

    467

    downloads

    0

    comments

    0

    adaptations

    Gender and Classroom Participation: A Case for Quantitative Analysis
    Teaching statistics to students using authentic research is one way to highlight the transferability and value of the material taught in the class. Below we describe an activity in Statistics for...

    Keywords: statisticsgenderpopulationProportionSampleEquality

    1155

    views

    86

    downloads

    0

    comments

    0

    adaptations

    "I Really Enjoy These Annotations:" Examining Primary Biological Literature Using Collaborative Annotation
    Critically reading and evaluating claims made in the primary literature are vital skills for the future professional and personal lives of undergraduate students. However, the formal presentation...

    Keywords: Stem cellsAdult neurogenesisCRISPR gene editing

    4108

    views

    421

    downloads

    0

    comments

    0

    adaptations

    Modeling Strep Throat Detection, Infection, and Spread Using an SIR Model and the Vensim Simulation Software
    The overarching goal of this lesson is to provide students with an opportunity to gain experience making and using biological models. Biological modeling can be used to investigate complex,...

    Keywords: infectious diseasebiological modelingSIR model

    1405

    views

    200

    downloads

    0

    comments

    0

    adaptations

    Forensic Phylogenetics: Implementing Tree-thinking in a Court of Law
    Here we describe an in-class activity developed for Evolutionary Biology and Biodiversity (BioEE1780) at Cornell University, an introductory course required of all biology majors. This activity...

    Keywords: phylogeneticsTree thinkingparaphyly

    1718

    views

    166

    downloads

    0

    comments

    0

    adaptations

    Tackling "Big Data" with Biology Undergrads: A Simple RNA-seq Data Analysis Tutorial Using Galaxy
    Analyzing high-throughput DNA sequence data is a fundamental skill in modern biology. However, real and perceived barriers such as massive file sizes, substantial computational requirements, and...

    Keywords: bioinformaticsDNA sequenceRNAseqgene expression

    4687

    views

    869

    downloads

    0

    comments

    0

    adaptations

    Targeting Misconceptions in the Central Dogma by Examining Viral Infection
    Understanding the central dogma and how changes in gene expression can impact cell function requires integration of several topics in molecular biology. Students often do not make the necessary...

    Keywords: datatranscriptionvirustranslationprotein functionmembrane transportPredictions

    2895

    views

    445

    downloads

    0

    comments

    0

    adaptations

    An Interrupted Case Study on Urban Prairie Restoration
    Engaging students in meaningful discussions can be a challenging task for science instructors, especially in introductory courses. The story-telling approach used in case studies can increase...

    Keywords: urban ecologyPrescribed fireEcosystem Servicesecological restorationwoody encroachmentrangeland ecology

    356

    views

    50

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search