You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    1-100-EngineeringDemographics-ModelingScenario
    Students show how models can be used to examine social issues. The students examine three different models and use numerical methods to apply each model to demographic data for the percentage of...

    Keywords: logisticpopulationImproved Euler MethodGompertzdemographicswomenautonomous

    288

    views

    157

    downloads

    0

    comments

    0

    adaptations

    A Potential Novel Ecosystem Service: Seagrass Meadows Reduce Disease in Nearby Corals
    In this lesson, students will receive an introduction to Poisson Generalized Linear Mixed Models in R utilizing data on coral diseases. In their code, students will assess if seagrass status has an...

    Keywords: environmental scienceseagrassecosystemcoral reefsEcosystem Services

    550

    views

    485

    downloads

    0

    comments

    0

    adaptations

    3-070-FallingInWater-ModelingScenario
    We model a small canister with ballast to keep it vertical as it falls through water in a graduated cylinder filled with water. We suggest several models in terms of resistance due to the media and...

    Keywords: datawaterresistancefallingbuoyancymass

    241

    views

    196

    downloads

    0

    comments

    0

    adaptations

    How to Design a Classroom Activity that Integrates 3D Print Models with Active Learning
    Student exploration of relevant physical models can deepen knowledge of course material. In this guide we describe a method by which instructors can integrate 3D printing technology with an...

    Keywords: active learning3D print modelsclassroom jigsaw

    2283

    views

    85

    downloads

    0

    comments

    0

    adaptations

    Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE
    We introduce TRACE, a framework for documenting model testing and analysis. TRACE is based on the recently proposed framework of model "evaluation" , and is designed to make models fit for...

    Keywords: standardizationgood modelling practicerisk assessmentdecision supportTRACEResources @ QUBES - Teaching & Reference

    978

    views

    211

    downloads

    0

    comments

    0

    adaptations

    How to Find a Gene: Retrieving Information From Gene Databases
    A strong understanding of distinct gene components and the ability to retrieve relevant information from gene databases are necessary to answer a diverse set of biological questions. However, often...

    Keywords: NCBItranscriptiontranslationGene StructureGene databasesEnsembl

    1494

    views

    347

    downloads

    0

    comments

    0

    adaptations

    Active Learning: Developing Self-Directed Learners Through Strong Intellectual Engagement
    When they were students, many current science instructors learned through traditional lectures. This mode of passive knowledge transmission has been shown to be less effective for student learning...

    Keywords: active learningmetacognitionconstructivism

    3113

    views

    258

    downloads

    0

    comments

    0

    adaptations

    A 360˚ View of COVID-19
    In March 2020, institutions underwent a massive transition to distance learning as a result of the COVID-19 pandemic. With so little time to devise new materials to maximize learning in the new...

    Keywords: geneticsImmunologyBiochemistrybioinformaticsmolecular evolutionpublic healthvirusCOVID19

    3492

    views

    1673

    downloads

    0

    comments

    0

    adaptations

    A clicker-based case study that untangles student thinking about the processes in the central dogma
    The central dogma of biology is a foundational concept that provides a scaffold to understand how genetic information flows in biological systems. Despite its importance, undergraduate students...

    Keywords: mutationtranscriptionphenotypecentral dogmatranslationDNA replication

    5303

    views

    904

    downloads

    0

    comments

    0

    adaptations

    5-024-PhGreatLakes
    In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.

    Keywords: Great Lakeslimnologycomparmentpollutioncompartmental modelsphosphorous

    265

    views

    228

    downloads

    0

    comments

    0

    adaptations

    Module M.5 Linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    446

    views

    179

    downloads

    0

    comments

    0

    adaptations

    Module M.6 Generalized linear models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    425

    views

    153

    downloads

    0

    comments

    0

    adaptations

    Does Urbanization Favor Exotic Species?
    In this lesson, students will learn about the exotic European honeybee (Apis mellifera), and why they are considered an important pollinator. They will be prompted to think about the impacts of...

    Keywords: RStudiogeneral linear modelsAICurbanizationPoisson Distributionnative speciesHoneybeeexotic species

    485

    views

    675

    downloads

    0

    comments

    0

    adaptations

    2018-LA_Peletier-Ordinary Differential Equations in Pharmacodynamics
    Good mix of theory, application, solution technique in a number of areas of applications of differential equations. Develops qualitative behavior issues. Exercises, but not about models, more about...

    Keywords: compartment modelpharmacokineticspharmacodynamicsorbitsturnover

    178

    views

    87

    downloads

    0

    comments

    0

    adaptations

    2015-Jonathon_Easton, Jonathan-Mathematical models of health focusing on diabetes-Delay differential equations and data mining
    This is an exhaustive study with very good references of a linear system of four differential equations with and without delay to model diabetes in a human being.

    Keywords: diabeteshealth model

    93

    views

    85

    downloads

    0

    comments

    0

    adaptations

    2015-Goodnow-EtAl-Mathematical Models of Water Clocks
    This is a historical tour of water clocks, known as clepsydra a Greek word meaning water thief. These devices were for telling time.

    Keywords: Torricelli's Lawwater clockBernoulli's Lawclepsydra

    97

    views

    45

    downloads

    0

    comments

    0

    adaptations

    2012-Campbell-EtAl-Parameter estimation in differential equation models with constrained states
    We introduce a method to estimate parameters and states from a differential equation model while enforcing interpretability constraints such as monotone or non‐negative states.

    Keywords: chemical engineeringsmoothing-based relaxation method

    176

    views

    29

    downloads

    0

    comments

    0

    adaptations

    2007-Hui_Luo-Population Modeling by Differential Equations
    A general model for the population of Tibetan antelope is constructed. The present model shows that the given data is reasonably logistic.

    Keywords: population dynamicsextinctionlogisticTibetan antelope

    138

    views

    35

    downloads

    0

    comments

    0

    adaptations

    2007-Graham-Lerch-Parameter Recovery for a Differential Equation Model
    This article presents a project for a differential equations class using an inverse problem based on the second order differential equation that models and electrical circuit.

    Keywords: laboratorydata collectionRLC circuitinvers problemelectrical circuit

    111

    views

    29

    downloads

    0

    comments

    0

    adaptations

    2001-Smith-Moore-The SIR Model for Spread of Disease
    A multiple part tour of SIR Models freely available with Maple, Mathematics, and MatLab support files at MAA site.

    Keywords: epidemicSIR modelEuler's methodherd immunityHong Kong flu

    177

    views

    80

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search