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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    An Active Textbook Converts "Vision and Tweak" to Vision and Change
    Multiple reports over more than a century have documented the problems with the way introductory biology has been taught in most colleges and universities. An influential recent report, Vision and...

    Keywords: Vision and Changeactive learningintroductory biologyFlipped classroomUndergraduatecore competenciescore conceptsactive textbookcurriculum reform

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    An Open Source, Collaborative Electronic Notebook for Undergraduate Laboratory Classes
    To overcome many of the limitations of the paper laboratory notebook (PLN), we developed an electronic laboratory notebook (e-LN) for the Dynamic Genome course at the University of California. The...

    Keywords: data collectionData annotationNotebook Skills

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    Using Undergraduate Molecular Biology Labs to Discover Targets of miRNAs in Humans
    Incorporating authentic research experiences into undergraduate labs, while shown to be particularly effective at engaging and retaining students in STEM majors, can be difficult to accomplish...

    Keywords: gene regulationmicroRNAsgene expression

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    Using Pathway Maps to Link Concepts, Peer Review, Primary Literature Searches and Data Assessment in Large Enrollment Classes: An example from teaching ecosystem ecology
    As with many other complex topics, teaching ecosystem ecology can be particularly difficult in terms of helping students understand the relationships between the various component parts. We...

    Keywords: energyecosystemNutrientsPathway

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    Bad Cell Reception? Using a cell part activity to help students appreciate cell biology, with an improved data plan and no loss in coverage
    With a veritable myriad of cell parts to cover, it is easy for educators to become locked into marathon presentations that become taxing for both the instructor and the students. While we hope and...

    Keywords: primary literatureprokaryotesCell partsEukaryotesOrganelle functionOrganelles

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    Why Meiosis Matters: The case of the fatherless snake
    A compelling reason to learn something can make all the difference in students’ motivation to learn it.  Motivation, in turn, is one of the key attitudes that drives learning.  This story...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

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    CourseSource 2.0: Finding high quality field-tested OERs, publishing evidence-based teaching activities, and promoting community collaborations.
    Workshop materials related to the CourseSource platform. Presented at the the 2021 BIOME Institute.

    Keywords: undergraduate biology educationCourseSourceopen educational resourceevidence-based teaching2021 BIOME

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    Consumable Science – Teaching Students to Translate Science for the General Public
    Poster about assignments with an emphasis on non-technical writing for a general audience. Presented at the 2021 BIOME Institute.

    Keywords: Scientific communicationscientific writing2021 BIOMEnon-technical writingtechnical writing

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    Graphing and mapping patterns of air quality in Los Angeles, California through an environmental justice lens.
    Air quality is an environmental issue that impacts everyone in Los Angeles. This activity presents current popular press articles about air pollution and environmental justice and maps and graphs...
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    Choosing healthy data for healthy relationships: how to use 5-point summaries, box and whisker plots, and correlation to understand global health trends.
    This module utilizes a user-friendly database exploring data selection, box-and-whisker plot, and correlation analysis. It also guides students on how to make a poster of their data and conclusions.

    Keywords: Querying databasesgraphingRatiosdata typesstatistical learningcorrelationBox Plotsqbcchealth sciences education researchnutrition & food scienceUnderstanding ratesCreate graphsInterpret graphsinterpret tablesHealth ScienceConcepts in Statisticsexplaining statisticsusing statistics

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    Exploring USGS streamflow data with dataRetrieval and Swirl
    This Swirl lesson walks through how to retrieve, view, and visually analyze streamflow and water quality data from the National Water Information System (US Geological Survey).

    Keywords: tool:swirl

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    Lichen Niches and Distributions Lab Activity
    This is a 2-part lab activity based on the EREN-NEON Flexible Learning Project: Lichens in Diverse Landscapes. Students conduct field surveys of lichen abundance near their homes and explore...

    Keywords: linear regressionGISNEONair qualityNational Ecological Observatory NetworkLichenfield based methodsEREN lichenairpollution

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Lichens in Your backyard (or campus): EREN-NEON Flexible Learning Project
    This project uses locally collected field data on lichen presence & abundance to better understand how lichens respond to changes. Navigation skills with a hand held compass are developed.

    Keywords: NEONNational Ecological Observatory Network

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    Oyster Restoration Success and Water Quality in the James and Rappahannock Rivers of Virginia
    This QUBES lesson uses statistical analysis to test whether or not oyster restoration sites in Virginia are successfully increasing the number of oysters and whether or not water quality is...

    Keywords: aquatic ecologymarine ecologyggplot2Pearson correlation coefficientSimple Linear RegressionnitrogenJames Rivertidyversechesapeake baywater qualityphosphorusharmful algae bloomsvirginia

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    Lichens in Your Local Landscape
    This project uses Lichens to connect students with their local environmental air quality. Through a short lab session, students assess lichens growing on trees on their campus. They then use class...

    Keywords: NEONNational Ecological Observatory Network

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    Food, Energy and Water Learning Modules (FEWLM) Workbooks
    FEWLM is a low-cost inquiry-based interdisciplinary STEM prototypical curriculum built on Next Generation Science Standards, systems thinking and informed engineering design pedagogy.

    Keywords: K-12inquiry-based learningNext Generation Science StandardsSystem Thinking

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    A Critical Guide to the PDB
    This Critical Guide in the Introduction to Bioinformatics series provides a brief outline of the Protein Data Bank – the PDB – the world’s primary repository of biological macromolecular structures.

    Keywords: NIBLSEGOBLETInstructorResources

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