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    Modeling Two Species Interactions Educational Module
    This set of files comprises an educational module for use in college-level ecology courses. It focuses on exploring two species interactions (mutualism, competition, and predator-prey dynamics)...

    Keywords: ecologyspecies interactionsmathematical modeling

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    Evaluating Local Adaptation and Conservation with Life Tables
    This module contains a sequence of activities designed for an undergraduate ecology lesson on stage-structured population models or life tables that use published data. Two versions are provided:...

    Keywords: ecologypopulation modelmatrix modelsclimate changelife cyclessensitivity analysispopulation ecologylife tablestage-structured modelsnet reproductive rateconservation planning

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    A Kinesthetic and Collaborative Activity to Improve Conceptual Understanding of Chemical Equilibrium
    While teaching in large lecture halls, it is challenging even for experienced teachers to hold their students’ attention for the entire class period. Owing to the large enrollment in STEM...

    Keywords: collaborationdemonstrationchemistrykinesthetic learningequilibriumhands-on learning

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    Human population growth case study
    A case study on human population growth that includes Human-Environment Interactions (HEI) from the Ecological Society of America's 4 dimensional ecology teaching framework. Meant to be used in...

    Keywords: exponential growthlogistic growthhuman-environmental interactions

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    Environmental Injustice: When the Grass is Greener on the Other Side
    Environmental pollution is a global threat that is especially prevalent in heavily industrialized and urbanized areas. Pollution can be found in many forms, such as natural and synthetic pollutants...

    Keywords: human healthenvironmental injusticeEnvironmental PollutionSystemic BiasesIdeological AwarenessUrban Ecology and Development

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    Kinetics of a Highly Conserved Enzyme - Carbonic Anhydrase
    This module contains exercises designed to introduce students to graphical representation of biological data. Students will explore the fundamental principles of enzyme kinetics including...

    Keywords: Excelintroductory biologycell biologygraphingslopeQuantitative reasoningdata visualizationquantitative biologyinterdisciplaryquantitative skillscorrelationenzyme functionInterpreting GraphsMichaelis-Mentenenzyme kineticsEnzyme activityenzyme inhibitionLinear and nonlinear analysisNIQBC2. Data and GraphsC4. mathematical modelsenzyme-substrateNIQB Interdisciplinary Quantitative Reasoningcarbonic anhydrase

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    Instructor Solutions Second Edition SIMIODE Textbook HTML Version
    This is material we make available for instructors teaching a modeling-first approach to differential equations when using the Second Edition of SIMIODE Textbook, Differential Equations: A Toolbox...

    Keywords: textbookhtmlSIMIODE textbookSecond Edition

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    A Journal Club Project to Promote Interpreting and Presenting Information From the Primary Scientific Literature
    Many undergraduate students receive little guidance on how to critically read, interpret data within, or present information from the primary scientific literature before they begin senior...

    Keywords: primary literaturejournal clubScience CommunicationfeedbackPeer reviewgroup workOral presentationProcess skillsPeer evaluationDevelopmental neurobiology

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    Glycolysis Can Be Fun: Rediscovering Glycolysis as a Problem-Solving Introduction to Metabolism
    A thorough understanding of glycolysis forms a foundation for students to analyze subsequent topics in metabolism, a core competency recognized by multiple national societies for biology and...

    Keywords: Problem based learningPOGILenzymesGlycolysisMetabolismFermentationchemical reactionsCard sorting activityCofactors

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    Two-Species Model
    These two Excel worksheets simulate the population growth of two interacting species. In isolation, each species grows logistically, but interaction effects between species may limit or enhance...

    Keywords: population growthcompetition modelsLotka-Volterra

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    Operon
    This Excel workbook models lac operon function in a partial diploid E. coli. The user chooses the bacterial genotype and the sugars present in the surrounding medium: the workbook then determines...

    Keywords: Lac OperonE. coli

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    Leslie/Lefkovitch Matrix Models for Age or Stage-structured Populations
    This Excel workbook uses the Leslie matrix model for population projection of age-class structured populations, and also allows Lefkovitch matrix models for stage-class structured populations.

    Keywords: survivalpopulation ecologyfecundityLeslie matrixeigenvalueseigenvectorsLefkovitch matrixage-class structured populationsstage-class structured populationsreproductive value

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    Hidden Markov Model
    Hidden Markov models are a set of mathematical tools that can be used to draw inferences about genomic and evolutionary processes.

    Keywords: hidden markov models

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    Evolution Through Natural Selection
    This Excel workbook simulates the population genetics of a single gene with two alleles, allowing the user to set the initial allele frequencies and enter parameters for a variety of different...

    Keywords: population geneticsNatural Selection

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    COVID-19 Model
    This Excel worksheet implements an SEAIHRD model for Covid-19 (Susceptible, Exposed, Asymptomatic infective, symptomatic Infective, Hospitalized infective, Recovered, Deceased).

    Keywords: infectious diseaseCOVID19

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    Continuous Growth Models
    This Excel worksheet compares user-input growth data with predictions under linear, exponential, and logistic models of growth. Introduces concepts of statistical analysis that can be additionally...

    Keywords: exponential growthlogistic growthcurve fittinglinear growthgrowth models

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    Biostatistical Tools
    This Excel collection of workbooks has tools for: 1. Linear regression through the origin 2. Linear regression not through the origin 3. Polynomial fit 4. A simple chi-square analysis to test...

    Keywords: linear regressionchi-square analysisHardy-Weinberg equilibriumpolynomial regression

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    Biological Cellular Automata Laboratory (BioCA Lab)
    This Excel module includes both linear cellular automata and 2D cellular automata. The original 3 rules for survival, death, and birth are implemented in this module, but users with some Excel...

    Keywords: cellular automata

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    Digital Intro: Revitalizing the “Introduction to Psychology” course through Project-based Learning
    Welcome to Digital Intro where we are transforming introductory courses into active, project-based experiences. Our projects expose students to a wide range of digital skills as they learn...

    Keywords: psychologyDigital IntroIntroduction to PsychologyIntroductory PsychologyGeneral Psychology

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    Using genomic data and machine learning to predict antibiotic resistance: a tutorial paper
    Antibiotic resistance is a global public health concern. Bacteria have evolved resistance to most antibiotics, which means that for any given bacterial infection, the bacteria may be resistant to...

    Keywords: Tutorialmachine learningantibiotic-resistanceArtificial Intelligence

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