You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Learning R for Biologists: A Mini Course Grab-Bag for Instructors
    As biology becomes more data driven, teaching students data literacy skills has become central to biology curriculum. Despite a wealth of online resources that teach researchers how to use R, there...

    Keywords: Rdata analysisRStudio

    2011

    views

    270

    downloads

    0

    comments

    0

    adaptations

    1975-David_Burghes-Population dynamics An introduction to differential equations
    In this paper a number of population models, which lead to differential equations, are derived. First-order variables separable equations are formulated from the Malthusian population model and its...

    Keywords: fishpredator-preylogisticpopulationdelaylag

    193

    views

    67

    downloads

    0

    comments

    0

    adaptations

    1967-Israelsson- Johnsson-Circumnutations In Helianthus Annuus
    A theory is given for circumnutations in plants, especially hypocotyls of Helianthus annuus, which were used as experimental material.

    Keywords: plantoscillationdelaycircumnutationturning

    149

    views

    36

    downloads

    0

    comments

    0

    adaptations

    1988-Michael Intriligator-Dagobert Brito-A Predator-Prey Model of Guerrilla Warfare
    The authors present a three variable: numbers of guerrillas, numbers of regular (government) soldiers, and size of population controlled by the guerrillas, at time t), nonlinear system of three...

    Keywords: combat modelguerrilla warfaregovernment

    138

    views

    49

    downloads

    0

    comments

    0

    adaptations

    1979-Brian_Winkel-Elementary_My_Dear_Watson_Differential_Equation
    Sherlock Homes explains to Doctor Watson how he solves a murdermystery using Newton's Law of Cooling.

    Keywords: Newton's Law of CoolingSherlock Holmestime of detah

    155

    views

    41

    downloads

    0

    comments

    0

    adaptations

    2012-Brian_Ingalls-Mathematical_Modelling_in_Systems_Biology
    This text provides an introduction to dynamic mathematical modeling of cellular processes. The emphasis is on using computational tools to investigate models of cellular phenomena.

    Keywords: biologygene regulatory networksModelsmetabolic networkssignal transduction pathwayselectrophysiology

    116

    views

    39

    downloads

    0

    comments

    0

    adaptations

    1994-Brian_Winkel-Ant_Tunnels_and_Calculus
    A simple mathematical model describing the time it takes for an ant to construct a linear tunnel of length x is produced from five intuitively acceptable assumptions.

    Keywords: differential equationsdifference equationfirst orderderivative definitionant tunnel

    155

    views

    64

    downloads

    0

    comments

    0

    adaptations

    1981-Nielsen_Francois-Rachel_Rosenfeld-Substantive_Interpretations_of_Differential_Equation_Models
    The interpretation of parameters of dynamic models is illustrated with reference to research on two substantive topics: political mobilization and intragenerational mobility.

    Keywords: differential equationsdynamical systemsFirst order linearintragenerational mobilitypolitical mobilizationmobility

    129

    views

    41

    downloads

    0

    comments

    0

    adaptations

    2011-Carl_Leinbach-Beyond_Newton_law_of_cooling_estimation_of_time_since_death
    The estimate of the time since death. Thus, the time of death is strictly that, an estimate. However, the time of death can be an important piece of information in some coroner’s cases, especially...

    Keywords: Newton's Law of Coolingtime of deathdouble exponentialcoroner

    100

    views

    42

    downloads

    0

    comments

    0

    adaptations

    1999-F_Brauer-What_Goes_Up_Must_Come_Down
    It is natural to ask whether a particle propelled upwards takes longer to fall to earth from its maximum height than it takes to rise to this maximum height for frictional forces that are nonlinear...

    Keywords: resistancefallingprojectilevertical projectile

    108

    views

    39

    downloads

    0

    comments

    0

    adaptations

    1988-Michael_Intriligator-Dagobert_Brito-A_Predator-Prey_Model_of_Guerrilla_Warfare
    The purpose of this paper is to analyze guerrilla warfare by means of a dynamic model. The model suggests specific paths for the evolution of such ward and how such wars might be fought or combatted.

    Keywords: simulationguerilla warfarewarfarecombat

    128

    views

    39

    downloads

    0

    comments

    0

    adaptations

    1994-T_Gruszka-A_Balloon_Experiment_in_the_Classroom
    The experiment consists of dropping a balloon from two different heights and recording the time it takes to hit the floor. The following experiment involves a balloon, a stopwatch, and a...

    Keywords: differential equationsresistancegravityfree fallaccelerationballoon

    129

    views

    44

    downloads

    0

    comments

    0

    adaptations

    1980-Peastrel-Lynch-Armenti-Terminal_velocity_of_a_shuttlecock_in_vertical_fall
    This paper offers a set of data on a falling shuttlecock (the moving object in badminton) in air. How the authors collected the data is described fully and can be replicated easily by modern...

    Keywords: parameter estimationdata collectionresistancefallingterminal velocityNewton's Second Law of Motionshuttlecock

    137

    views

    36

    downloads

    0

    comments

    0

    adaptations

    2009-Brian_Winkel-Modelling_Growth_Of_an_OilSlick
    An oil-slick spreads at sea. From time to time, but irregularly, a helicopter is dispatched. On each trip, it arrives over the slick, the pilot takes a picture, waits 10 minutes, takes another, and...

    Keywords: differential equationssimulationparameter estimationdifference equation

    224

    views

    58

    downloads

    0

    comments

    0

    adaptations

    2014-C_W_Groetsch-S_A_ Yost-Vertical Projection_in_a_Resisting_Medium_Revelations_on_Observations_of_Mersenne
    This article, inspired by a 17th-century woodcut, validates empirical observations of Marin Mersenne (1588–1648) on timing of vertically-launched projectiles for a general mathematical model of...

    Keywords: resistanceprojectile motionprojectilefluidMersenne

    113

    views

    40

    downloads

    0

    comments

    0

    adaptations

    2010-Kar-Chakraborty-Bioeconomic_modelling_of_a_prey_predator_system_using_differential_algebraic_equations
    We propose a biological economic model based on prey-predator dynamics where the prey species are continuously harvested and predation is considered with type II functional response.

    Keywords: economicsbifurcationharvestfisheryequilibriumdifferential algebraic equation

    140

    views

    33

    downloads

    0

    comments

    0

    adaptations

    2017-Thomas_Judson-The_Ordinary_Differential_Equations_Project
    This text is intended for a one-semester undergraduate course in ordinary differential equations. There are additional exercises or computer projects at the ends of many of the chapters.

    Keywords: projectsmathematical modeltextbooktechniquesfreeproofssageTheory

    211

    views

    81

    downloads

    0

    comments

    0

    adaptations

    2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
    I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can...

    Keywords: biologytextbooksystemsdyanmical system

    167

    views

    63

    downloads

    0

    comments

    0

    adaptations

    2018-Dyjuan_Tatro-The_Mathematics_of_Cancer-Fitting_Gompertz_Equation_to_Tumor_Growth
    Fitting the Gompertz Model to long term breast cancer study data, this project ascertains gompertzian parameters that can be used to predicts tumor growth as a function of time.

    Keywords: tumorgrowthGompertzfittingparameter

    126

    views

    47

    downloads

    0

    comments

    0

    adaptations

    2019-Radulescu-Lundgren-A_pharmacokinetic_model_of_lead_absorption_and_calcium_competitive_dynamics
    We build and analyze a compartmental model of lead pharmacokinetics, focused specifically on addressing neurotoxicity.

    Keywords: QUBES Leadership Teamparametersabsorptionbifurcationpharmacokineticscalciumcognitive decline

    108

    views

    42

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search