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    1992-Emelie_Kenney-Differential_equations_and_the_AIDS_epidemic
    This paper describes a lecture for Calculus II students in which the Acquired Immune Deficiency Syndrome was used to motivate study of first-order linear differential equations and the derivative...

    Keywords: datafirst orderparameterAIDS

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    Disease Spread Simulation with M&M's and Information on the wider SIMIODE community
    This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at www.simiode.org

    Keywords: resourcesdifferential equationsmodelingsimulationmoduledataepidemicsdiseasecommunityapplied mathematicsResources @ SIMIODEretinal surgeryinsect colonyLSDm&mparameter estimationin-class activityproject

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    2009-Munz-EtAl-When Zombies Attack-Mathematical modelling of an Outbreak of Zombie Infection
    We introduce a basic model for zombie infection, determine equilibria and their stability, and illustrate the outcome with numerical solutions.

    Keywords: zombiesinfectionepidemicwater treatmentlatent infectionquarantineimpulsive eradication

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    2011-Nancy_Rodrıguez-Applied Partial Differential Equations in Crime Modeling and Biological Aggregation
    In the first part we study a fully-parabolic system of PDEs for residential burglary ‘hotspots’ (spatio-temporal areas of high density of crime). In this work we are concerned with the existence...

    Keywords: biologyDiffusionKeller-Segel modelchemotaxiscrime

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    A How to Guide and Template for Designing a Puzzle Based Escape Room Game
    Educational games are one active and effective way of engaging students with material while also providing additional motivation to tackle challenging concepts. A particularly popular game concept...

    Keywords: Problem SolvingCollaborative WorkCorrect Misconceptions

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    2020-TeachingModule-GeometricBehaviorOfLinearSysteModeling
    This module concentrates on the geometric properties of a system of 2 linear, homogeneous first order differential equations in 2 variables as dictated by the corresponding eigenvalues. Students...

    Keywords: modulelinear systemsdigoxinTeaching Module

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    2017-Helen-Byrne-Further Mathematics Biology
    These studies will be in the context of ecological, biological and biochemical applications.

    Keywords: epidemicschemotaxisenzyme-substrateion channelsnerve pulsesgene proagationtumour

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    2017-ASHP-Intro to Pharmacokinetics and Pharmacodynamics
    This is the introductory Lesson 1 in an online set of materials to introduce Pharmacokinetics and Pharmacodynamics.

    Keywords: absorptioncompartmentbloodstreamplasmapharmacokineticsdrugpharmacodynamics

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    2017-ASHP-Intro to Pharmacokinetics and Pharmacodynamics
    This is the introductory Lesson 1 in an online set of materials to introduce Pharmacokinetics and Pharmacodynamics.

    Keywords: absorptioncompartmentbloodstreamplasmapharmacokineticspharmacodynamicstherapeutic concentration rangedrug dispositiondrug response

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    2010-Shaza_Hussein-Predator-Prey Modeling
    The objective of this project was to create five projections of animal populations based on a simple predator-prey model and explore the trends visible.

    Keywords: population dynamicspredator-preylogistic equationEndangered Catsdecreasing populationrabbitsfoxes

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    2004-Mitchell-von Meien-Krieger-Dalsenter-A review of recent developments in modeling of microbial growth kinetics
    Mathematical models are important tools for optimizing the design and operation of solid-state fermentation (SSF) bioreactors. Such models must describe the kinetics of microbial growth.

    Keywords: Filamentous Fungisolid-state fermentationgrowth kineticsdiffusion-reactionoxygen transfer

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    2020-Ciaroshi-How_COVID-19_Spreads_MathModels
    On December 31, 2019, the Chinese city of Wuhan reported an outbreak of a novel coronavirus (COVID-19) that has since killed over 4,200 people. As of March 11, 2020, over 118,000 infections—have...

    Keywords: diseasecovidoutbreakWuhancoronoavirus

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    1-102-CancerTumor-ModelingScenario
    This module guides students in the use of differential equation models to predict cancer growth and optimize treatment outcomes. Several classical models for cancer growth are studied, including ...

    Keywords: optimizationlogisticpredictiondata fittingpower lawGompertzcancer growtheponentialBertalanaffy

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    1-102C-CancerGrowth-ModelingScenario
    This module guides students in the use of differential equation models to predict cancer growth and study treatment outcomes. Several classical models for cancer growth are presented including...

    Keywords: optimizationcancerlogisticexponentialpredictiontumorgrowthdata fittingpower lawBertanffyGompertz

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    6-007-FunctionsAndDerivativesInSIRModels-ModelingScenario
    Given a system of differential equations, how do the solution graphs compare with the graphs of the differential equations? Students tackle this question using SIR models for well-known infectious...

    Keywords: epidemiologyspecies interactionsderivativesvisualizationinfectionSIR modelsLaw of Mass Action

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    6-029-TumorGrowth-ModelingScenario
    This modeling scenario guides a student familiar with single ordinary differential equation (ODE) models towards the development of a more complex system of two ODEs for describing the evolution of...

    Keywords: Pop_Growth Pilotlogisticcomparmenttumorsynthetic datasum of squares error

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    A Critical Guide to the PDB
    This Critical Guide in the Introduction to Bioinformatics series provides a brief outline of the Protein Data Bank – the PDB – the world’s primary repository of biological macromolecular structures.

    Keywords: NIBLSEGOBLETInstructorResources

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    A Critical Guide to BLAST
    This Critical Guide in the Introduction to Bioinformatics series provides an overview of the BLAST similarity search tool, briefly examining the underlying algorithm and its rise to popularity.

    Keywords: NIBLSEBLASTGOBLETInstructorResources

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    Let's Talk About COVID-19
    This exercise asks you to write a short paper reflecting on your personal experiences (or those you have read about) with COVID-19
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    Discovery Poster Project
    Engaging in undergraduate research can be exciting yet intimidating to first-year students at large research universities. For first-generation college students, whose pre-college exposure to...

    Keywords: researchprimary literaturePostercore concepts

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