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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Is bigger always better? An investigation on the effect of drought on different sizes of trees
    This data set was compiled from worldwide data to examine the effects of drought on trees. Included in the dataset are measurements of growth and mortality as they relate to the size category of...

    Keywords: statisticsforest ecologydata analysisclimate changeANOVAGraphing Functionsforest health

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    Failing (in order) to succeed: Exploring how students cope with science failures in research-based courses
    Slides and related materials from the presentation given by Dr. Lisa Corwin as a part of the 2020 BIOME Institute.

    Keywords: researchresearch-based classroom instructionFailureresearch failure

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    Microbiomes forAll: The Research Experiences in Microbiomes Network
    Poster on REMNet presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: undergraduate researchcourse-based undergraduate research experiencemicrobiomesmicrobiomeCUREREMNet

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    Traditional Ecological Knowledge and Conservation
    Traditional Ecological Knowledge (TEK) is based on deep understanding of systems from observations made over hundreds to thousands of years. This resource connects TEK to modern conservation...

    Keywords: climate changeenvironmental justiceTraditional ecological knowledge

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    Hardy-Weinberg Equilibrium: a swirl resource
    Students will use swirl to understand Hardy-Weinberg equilibrium. The lesson starts with observed numbers of individuals for each genotype, and students will work through a number of steps to...

    Keywords: Hardy-Weinbergpopulation geneticsEvolutionevolutionary ecologyR programming languageSwirl

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    Analyzing Nutrient Simulation Experiments with a one-way ANOVA
    We discuss what tests are appropriate to analyze the data from nutrient simulation experiments. They will conduct one-way ANOVAs and a post hoc test using a dummy dataset and interpret the results.

    Keywords: biostatisticsInterdisciplinary STEMR programming languageaquatic ecologylimnologySwirl

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    Demography from "virtual cemeteries"
    This module is a modification of the Lanza module in TIEE Volume 8. Rather than requiring students to visit cemeteries outside of class, this modification has students collect data from online...

    Keywords: ecologyResources @ ESA - TIEEdemographysurvivorshiplife tables

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    Chi-squared test of independence between two categorical variables
    In this lesson, students will have the opportunity to work through a chi-squared test of independence between two categorical variables.
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    Using Data Science Skills and Digitized Natural History Collections Data to Investigate Ecological and Evolutionary Principles in Introductory Biology Courses
    Session presentation Biodiversity Literacy in Undergraduate Education project at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: data sciencenatural history collections2019 QUBES/BioQUEST Summer WorkshopBLUEdigitized natural history collections

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    Processes that Regulate Patterns of Species and Genetic Diversity
    This activity was developed for an undergraduate upper level ecology course for Environmental or Biological Science majors. Classes of ~20 students work best for the activity.
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    How Many More Thymes & Herbivore Defense
    Adaptations to the How Many More Thymes? case study featuring terpene-based herbivore defense and pollinator attraction in Nicotiana plants.

    Keywords: food websgenotypephenotypeHerbivoryherbivoredeterrencemonoterpeneproducerchemotypeThymus vulgaristhymeMediterranean ecosystemchemical defensesManduca sextaNicotiana

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    Discrete Math Modeling with Biological Applications (Course Materials)
    These are the materials for Math 214 offered at Rhodes College.

    Keywords: labsagent-based modelingDiscrete Difference Equationsmatrix modelscoursebiomath coursedemonstrationin-class activitylab protocolproblem set

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    Quantifying and Visualizing Campus Tree Phenology
    This lesson, published on CourseSource, enables collaborative teams to collect, quantify, and analyze observable seasonal changes in nature.

    Keywords: ecologyBiodiversityphenologyplant biologyCourseSource

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    Mentoring Pacific Island Students for Conservation
    This undergraduate internship program focuses on mentoring Pacific Island Students into conservation careers through development of skills, networks and sense of self, while being grounded in...

    Keywords: internshipconservation ecologyplace based learningSelf-Efficacycultural contextExperiential Education

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    Working with plant phenology data and fitting a nonlinear model using least squares in R
    A participatory live-coding lesson on working with NEON phenology data and fitting a sine-wave model to determine when different species get and lose their leaves.

    Keywords: modelingRphenologyNEONRstatscodeparticipatory live-coding

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    Food Chain Dynamics In A Simple Ecosystem
    In this lab, students will work with a simple algae/brine shrimp environment to learn about food chains and population dynamics.

    Keywords: ecologyecosystemsfood chainalgae

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    The Polar Bear of the Salt Marsh?
    National Center for Case Study Teaching in Science- in this interrupted case study, students follow a young naturalist as she explores why saltmarsh sparrows are increasingly rare in coastal...

    Keywords: Coastal wetlandsConnecticutmanagementnortheastsea-level risesalt marsh

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    Measuring the Health of the Earth Using the Theory of Island Biography
    This module uses a variety of available datasets to explore methods of calculating biodiversity and measuring landscape as well as the relationship between those.

    Keywords: moduleEvolutionecologycollege algebraearth scienceOceanographygeophysicalResources @ DIMACSResources @ QUBES - Teaching & Reference

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    Advancing population ecology with integral projection models: a practical guide
    Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to make population projections using regression...

    Keywords: IPMintegral projection modelspopulation growthreviewsdemographyelasticitylife historymatrix projection modelpopulation growth ratesensitivitystage structurevital ratesregressionResources @ QUBES - Teaching & Referencecovariatesanalytics

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    Using Data in Limnology
    Poster on the interdisciplinary study of limnology as a "PEAK" integrative learning experience at Concordia Collegepresented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: student researchinterdisciplinary educationlimnologyeco-informaticsSummer Workshop 2018

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