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    Sample NetLogo Code of Bacterial Growth
    Each NetLogo file is a sequential version of the final bacterial growth model produced in the Bacterial Growth Tutorial. These are to be used as checks to one's understanding alongside the tutorial.
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    Salamander Mark-Recapture using SPARCnet plots with the Schnabel Method
    A salamander mark-recapture module where students field collect a third survey occasion to estimate population size

    Keywords: Field researchsalamanderCapture mark-recaptureAudience level - Advanced UG

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    Adapting InTeGrate Materials for Online Courses
    As part of my second mentoring of the InTeGrate FMN for QUBES, I chose to focus on my conversion of several resources to an online course format.
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    EQUITY, SOCIAL JUSTICE AND BIOLOGY: DEMYSTIFYING RACE WITH GENETICS OF HUMAN SKIN COLOR
    Poster on a case study on the genetics of human skin color presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: geneticssocial justiceSummer Workshop 2018racehuman skin color

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    An Introduction to Red Backed Salamander Ecology
    A summary of literature on red backed salamander ecology and life history compiled by Biology students at Susquehanna University

    Keywords: natural historypopulation ecologysalamander

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    Mimicry in a Diverse Community of Arthropods
    Module exploring how researchers exposed arthropod mimics that use a golden patch to warn of unpalatability to predators with different prey preferences to determine how effective their warnings were.

    Keywords: EvolutionbiomimicryScientific ProcessStatistics and Math

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    Performing a Population Viability Analysis from Data Students Collect on a Local Plant
    Experiment included in Teaching Issues and Experiments in Ecology (TIEE) Volume 9

    Keywords: RResources @ ESA - TIEEmatrix model

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    A Laboratory Module That Explores RNA Interference and Codon Optimization Through Fluorescence Microscopy Using Caenorhabditis elegans
    Scientific research experiences are beneficial to students allowing them to gain laboratory and problem-solving skills, as well as foundational research skills in a team-based setting. We designed...

    Keywords: microscopyC. elegansquantitative analysisinquiry-based learninggene expressionRNA interferenceCodon UsageLaboratory Module

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    Fly Exercise: A Simple Experiment to Test the Physiological Effects of Exercise on a Model Organism
    Model organisms are commonly used to study and experimentally explore biological processes in ways that are technically or ethically not possible in humans. For this reason, model organisms are an...

    Keywords: exerciseenzyme kineticsmetabolite concentrationmodel speciesphysical activity

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    Mock Drug Activity Enhances Student Learning About the Challenges of HIV/AIDS Therapy
    While traditional didactic coursework is important for learning about the scientific aspects of HIV/AIDS, it is difficult to convey social aspects of the epidemic. Due to effective drug therapies,...

    Keywords: drug resistanceRetrovirusViral replication

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    Before You Start Publishing on QUBES
    This handy guide follows the Instructions for Authors to keep together all the text that can then be copied during the publication process. Notes and comments in this document are italicized so...

    Keywords: QUBESOERpublish on QUBESpublish

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    Exploring Marine Primary Productivity with Descriptive Statistics and Graphing in Excel
    In this activity, students use real water chemistry data and descriptive statistics in Excel to examine primary productivity in an urban estuary of the Salish Sea. They will consider how actual...

    Keywords: statisticsecologydataExcelgraphingBiochemistryOceanographymarine ecosystemsmarine ecologydescriptive statisticslong-term datasetsmarineMicrosoft Excelmarine biologyplanktonOutliersMarine ScienceqbccUsing ExcelphytoplanktonCreate graphsInterpret graphsConcepts in Statisticslarge datasetexplaining statisticsusing statisticsPacific NorthwestSalish Seaprimary productivitywater chemistryestuarygraphing in Excelformulas in Excelchlorophylltime-series plotsocean

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    Distributions CURE- Exploring Species Distribution Changes and their Drivers
    This course-based undergraduate research experience (CURE) uses digitized natural history collections data to answer questions about species distributions and their drivers. This inclusive CURE can...

    Keywords: Evolutionecologyidigbiodata management#iNaturalistcourse based undergraduate research experienceshuman impactsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsGBIFQGISBCEENETgeoreferencing

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    Exploring Marine Primary Productivity with Descriptive Statistics and Graphing in Excel
    In this activity, students use real water chemistry data and descriptive statistics in Excel to examine primary productivity in an urban estuary of the Salish Sea. They will consider how actual...

    Keywords: statisticsecologydataExcelgraphingBiochemistryOceanographymarine ecosystemsmarine ecologydescriptive statisticslong-term datasetsmarineMicrosoft Excelmarine biologyplanktonOutliersMarine ScienceqbccUsing ExcelphytoplanktonCreate graphsInterpret graphsConcepts in Statisticslarge datasetexplaining statisticsusing statisticsPacific NorthwestSalish Seaprimary productivitywater chemistryestuarygraphing in Excelformulas in Excelchlorophylltime-series plotsocean

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    6-068-VisualizingPredator-PreyCycles
    In this modeling scenario, we propose a gentle introduction to limit cycles using nullcline analysis and a spreadsheet graphical approach via the fourth-order Runge-Kutta method. We will be...

    Keywords: nullclinespredator-preyGeometrypredatorRunge-Kuttapreylimit cycle

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    Parasite Lifecycle Storybook: Nick the Tick
    Nick the Tick is story about parasite lifecycles suitable for use in university or K-12 settings. The story is about a newly hatched tick named Nick and his adventures as he attempts to find his...

    Keywords: parasiteslife cyclesscience illustrationStorybook

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    Comparing the Effect of Manure Compost vs. Fertilizer on the Growth of Raphanus sativus
    Manure compost is an organic fertilizer made up of manure or natural nitrogen contents, and typically only supplies crops with nitrogen. Synthetic fertilizer is a man-made compound mixture made...

    Keywords: agricultureplants

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    2017-ASHP-Intro to Pharmacokinetics and Pharmacodynamics
    This is the introductory Lesson 1 in an online set of materials to introduce Pharmacokinetics and Pharmacodynamics.

    Keywords: absorptioncompartmentbloodstreamplasmapharmacokineticsdrugpharmacodynamics

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    2017-ASHP-Intro to Pharmacokinetics and Pharmacodynamics
    This is the introductory Lesson 1 in an online set of materials to introduce Pharmacokinetics and Pharmacodynamics.

    Keywords: absorptioncompartmentbloodstreamplasmapharmacokineticspharmacodynamicstherapeutic concentration rangedrug dispositiondrug response

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    2015-Cano-EtAl-Bringing partial differential equations to life for students
    This work describes how to use an authoring tool, Easy Java Simulations, to build interactive simulations using FreeFem++ (Hecht F 2012 J. Numer. Math. 20 251) as a PDE solver engine.

    Keywords: Java SimulationFreeFemauthoring toolsauthoring methodsphysical modellingclassroom teaching

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