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    Healing the scars: Tropical rainforest carbon cycling. Does it matter which tree species you plant?
    This online module explores how differences in traits of tropical tree species translate into differential effects on the carbon cycle, integrating ecological information across scales and the...

    Keywords: climate changecarbon cyclingtropical biology4DEE Frameworkforest restorationtropical tree speciessoil carbon

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    1-104A-T-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions and comparing to actual...

    Keywords: regressioninfectionCOVID19carrying capacitylogistic equationexponential model

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    1-015-DimensionlessVariables-TechniqueNarrative
    This material introduces the idea of ``rescaling'' for ordinary differential equations (ODE's) by the use of dimensionless variables. In practice this is an extremely common and useful prelude to...

    Keywords: linearizationdimensional analysistime scalescalingdimensionless variablesspatial scale

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    The Edge Effect
    This module has students venturing outdoors to take a 50m transect and collect abundance data on plants utilizing quadrats in both edge and interior environment. Mathematically the goals of this...

    Keywords: statisticsecologydata analysisExcelintroductory biologygraphingp-valuest-testsQuantitative reasoninghypothesis testingsample sizestatistical testsinterdisciplinarystatistical analysisCommunity Ecologyspecies diversityvariationdiversity indexvinterpret dataNIQBShannon diversity indexC3. Statistical AnalysisC6. Quantitative Languageedge effect

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    2017-William_Bialek-Boxes and Arrows To Differential Equations
    This material uses pictures to build kinetic models of reactions and then offers analytic solutions.

    Keywords: Michaelis-MentenEnzymesubstrateDNA\kinetis

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    HITS: A Network to Create Inquiry-based Case Studies | BIOME 2022
    We created the NSF-funded High-throughput Discovery Science & Inquiry-based Case Studies for Today’s Students (HITS) Research Coordination Network to address this gap. HITS brings together...

    Keywords: case studiesHigh-throughput Discovery Science & Inquiry-based Case Studies for Today’s StudentsHigh-throughput (HT) approaches

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    5-001-LSD-ModelingScenario
    We describe the use of a two compartment model of a linear system of first order linear differential equations to model lysergic acid diethylamide (LSD) in the body. We provide the data from the...

    Keywords: LSDSpanishcompartmentpharmacokineticslysergic acid diethylamide

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    1-070-FisheryHarvest-ModelingScenario
    Students model with logistic growth, harvesting, and diffusion in analyzing ocean fisheries of the Atlantic cod. We help students build models, ever more complex, to capture physical realities. At...

    Keywords: logisticDiffusionmanagementharvestfishery

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    1-008-HangTime-ModelingScenario
    We present a modeling opportunity for students in which they model the vertical position of a basketball player taking a jump shot. The goal of the scenario is to get students to consider the...

    Keywords: gravityhang timNewton's Second Law of Motionjump shot

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    3-065-UpDown-ModelingScenario
    We model the height of a launched object which is subject to resistance proportional to velocity during its flight. We ask questions about the motion as well, e.g., highest point or apex and...

    Keywords: terminal velocityNewton's Second Law of Motionvelocitymotionapex

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    1-076-ClimateBifurcation-ModelingScenario
    We cover simple zero and one dimensional models for the mean temperature of the Earth. These models can exhibit bifurcations.

    Keywords: energy balanceclimateenergyalbedoHysteresisbifurcationice-agegreenhousebalanceStefan Boltzmann Law

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    7-011-CoupledSystemLaplace-ModelingScenario
    Differential equations and Laplace transforms are an integral part of control problems in engineering systems. We consider a baby warming device.

    Keywords: transfer functionpolycarbonatebaby heatercoupled systemheating

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    7-006-LaplaceTransformBirth-TechniqueNarrative
    We present a way of introducing the Laplace Transform as the continuous analogue of a power series expression of a function.

    Keywords: Transformationspower series

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    5-012-LinearSystemConjecture-TechniqueNarrative
    Students go from the solution for y'(t) = k*y(t) to a natural extension to the solution conjecture of a system of two constant coefficient, homogeneous, linear differential equations introducing...

    Keywords: discovery learningconjecturesolutionsubstitution

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    2-005-LinearizeItAll-TechniqueNarrative
    Linear approximations are often used to simplify nonlinear ordinary differential equations (ODEs) for ease in analysis. The resulting linear approximation produces an ODE where closed form...

    Keywords: computationerrorTorricelli's Lawdata fittinglinear approximation

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    2-001-NumericalMethodsComparisons-TechniqueNarrative
    This material teaches the basics of numerical methods for first order differential equations by following graphical and numerical approaches. We discuss the order of accuracy of the methods and...

    Keywords: Euler's methodimproved Euler's methodRK3 methodsRK4 methodsorder of accuracyabsolute errorCPU time

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    1-010-AtmosphericCO2Bifurcation-TechniqueNarrative
    Students are introduced to the concept of a bifurcation in a first-order ordinary differential equation (ODE) through a modeling scenario involving atmospheric carbon dioxide whish is taken as a...

    Keywords: carbon dioxideSurface Atmosphere Exchangebifurcationfold bifurcationsaddle node

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    1-003-IntroNumericalMethods-TechniqueNarrative
    We develop elementary approaches to numerically solving first order differential equations with Euler's Method, Improved Euler's Method and develop these geometrically to compute numeric solutions...

    Keywords: analytic solutionEuler's methodimproved Euler's method

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    1-087-ThanosPopulationDynamics-ModelingScenario
    In the end of the “Avengers Infinity War,” the villain Thanos snaps his fingers and turns half of all living creatures to dust with the hope of restoring balance to the natural world. How does this...

    Keywords: logisticexponentialpopulationThanos

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    1-034-T-FishMixing-ModelingScenario
    This activity gives students a chance to build the underlying differential equation and/or difference equation for a mixing problem using tangible objects (fish) and a student-designed restocking...

    Keywords: simulationfishFishingmixingrestocking

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