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    Java array and random number generator, hints
    Java, UTC, Fall 2017

    Keywords: videosjavabioinformaticsgenomicsyoutuberandom number generator

    1236

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    Introduction to Probability, Statistics, and Random Processes
    This site is the homepage of the textbook Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik.

    Keywords: textbookcurriculumcourseproblem setsolutions

    3260

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    Exploring Random Mutation and Selection: Avida-Ed Lab Book Exercise 2
    An introductory activity exploring the role of random mutation in natural selection using the Avida-ED simulation.

    Keywords: avida-edmutationsoftware simulationsSelectionvariation

    990

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    GeoPhyl
    This Excel workbook allows students to explore evolution over space and time using published data on the invasive plant Tamarix (salt cedar).

    Keywords: Invasive SpeciesTamarixsalt cedarpermutation testrandom geographic distribution

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    1-030-RandomPerturbation-TechniqueNarrative
    After a brief historical view of this problem, we will demonstrate the derivation of first order linear differential equations with random perturbations.

    Keywords: random perturbationBrownian motionLangevin equationRiemann-Steiltjes integralWiener processIto's calculus

    374

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    2015-Carl_Lutzer-Using Expected Value to Introduce the Laplace Transform
    We propose an introduction to the Laplace transform in which Riemann sums are used to approximate the expected net change in a function, assuming that it quantifies a process that can terminate at...

    Keywords: Expected ValueRiemann sumnet change

    134

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    Exploring the Introduction of Genetic Variation by Random Mutation: Avida-Ed Lab Book Exercise 1
    An introductory activity introducing the role of random mutation in generating genetic variation using the Avida-ED simulation.

    Keywords: geneticsEvolutionavida-edmutationsoftware simulations

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    Phylogeography Simulator
    This Excel workbook simulates the phylogeography of an asexually reproducing species.

    Keywords: Phylogeographymutation ratesAsexual reproductionspecies dispersal

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    13

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    Genetic Code
    This Excel workbook allows the user to recreate the steps in breaking the genetic code. The user enters the sequence of repetitive synthetic mRNA strands, which are translated in vitro to produce...

    Keywords: mRNAgenetic code

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    33

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    1-027-StochasticProcesses-ModelingScenario
    We build the infinite set of first order differential equations for modeling a stochastic process, the so-called birth and death equations. We will only need to use integrating factor solution...

    Keywords: VarianceMeanstochasticrandomoperations researchindustrial engineeringPoisson processtraffic

    307

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    1-046-GoingViral-ModelingScenario
    Students participate in a simulation of the spread of a viral disease in the classroom and model the process with a logistic differential equation. The simulation uses random numbers and the entire...

    Keywords: simulationmathematical modeldatalogisticrandom number generatorfittingrandom process

    458

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    183

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    An Introduction to the R Programming Environment
    An online module introducing students and biologists to R, published in American Phytopathological Society

    Keywords: epidemiologyRecologyR programming languagebioinformaticsprogrammingplant biologyNIBLSEplant pathology

    3162

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    749

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    EvolSeq
    An Excel worksheet that simulates the molecular evolution of DNA sequences.

    Keywords: molecular evolutionDNA

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    1-047-Condensation-ModelingScenario
    We simulate the random motion of 200 particles in a 50 by 50 square in which a particle bounces off the two vertical and top walls and condenses on the bottom wall. Animations are produced and...

    Keywords: simulationsum of square errorscondensationbest fit

    372

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    910

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    Investigation of Subunit Interactions of Glyoxysomal Malate Dehydrogenase Using Engineered Cysteine Residues
    A research poster.

    Keywords: JoCURE

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    2010-Scott_Carrell-James_West-Does_Professor_Quality_Matter-Evidence_from_Random_Assignment_of_Students_to_Professors
    In the postsecondary environment, scores on student evaluations of professors are typically used to measure teaching quality. We possess unique data that allow us to measure relative student...

    Keywords: teachingevaluationfollow-on coursestudent achievement

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    1-039-StochasticPopModels-ModelingScenario
    We develop strategies for creating a population model using some simple probabilistic assumptions. These assumptions lead to a system of differential equations for the probability that a system is...

    Keywords: Probabilitypopulation dynamicsVarianceMeanstochasticdeterministic

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    1-047a-CondensationOptimization-ModelingScenario
    We seek to optimize a condensation process which is modeled by a simulation using the random motion of 200 particles in a 50 by 50 square in which a particle bounces off the two vertical and top...

    Keywords: simulationdataoptimizationenergycondensationbest fitcostsum of scquare errors

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    Biodiversity Conservation in Agriculture
    Biodiversity is decreasing rapidly each year and agriculture is a large contributor. In order to minimize biodiversity loss, we must study how local and landscape management in agriculture impact...

    Keywords: conservationagricultureBiodiversitybiodiversity conservationagricultural conservation

    554

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    504

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    Exploring Fitness and Population Change under Selection: Avida-Ed Lab Book Exercise 3
    An introductory activity exploring the process of natural selection in action using the Avida-ED simulation.

    Keywords: population geneticsfitnessavida-edsoftware simulationsSelectionevolutionary fitness

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