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    Synapse Transmission and Action Potentials
    This module introduces action potentials in the context of understanding nerve impulses. It is intended for an introductory biology audience.

    Keywords: InequalitiesOpenStaxAnimal Physiology

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    Agent-Based Modeling Course Materials
    Materials created for an upper level ABM course. Prerequisite: Students have taken either (a) another modeling course, or (b) the introductory computer science sequence.

    Keywords: agent-based modelingindividual-based modelingcourse materials

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    Avian Censys Analysis
    This Swirl course uses ecological data of bird counts and habitat variables to estimate inter-observer variability and the relationship of birds with habitat variables.

    Keywords: ecologyregressionaverageserror estimates

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    Regulation Across Scales: Data Points Icebreaker Jigsaw
    Students examine regulation at cellular, physiological, and ecological scales in a data-based jigsaw to explore how double-negative logic operates across biological systems. This was used as a...

    Keywords: pathwaysgene regulationtrophic cascadesregulationcross-scalecholesterol synthesisLac OperonYellowstone

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    Figure of the Day: Disease version
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown. Forked version with all infectious disease graphs.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

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    Introduction to R Course
    Free Introduction to R Course at DataCamp

    Keywords: Rdata scienceonline learningcoursefree

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    Computational Biology using R
    This is an introductory level course on computational biology.

    Keywords: simulationmoduleRcourseprojectsolutions

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    Java Applets for Power and Sample Size
    This is a Java application that allows you to do power and sample-size calculations for a number of standard statistical models.

    Keywords: statisticspowerstatistical powersample sizeeffect sizestatistical tests

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    Innovative Teaching Exchange: Asking Questions in Probability Class
    This is an article in MAA's Innovative Teaching Exchange that describes strategies to get students past thoughtless number crunching, guessing, and intuition when it comes to solving probability...

    Keywords: Probabilitypedagogyteaching strategies

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    Introduction to Probability, Statistics, and Random Processes
    This site is the homepage of the textbook Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik.

    Keywords: textbookcurriculumcourseproblem setsolutions

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    Citations
    Published Avida-Ed article

    Keywords: EvolutioncurriculumSelectionDigital Organisms

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    Measuring the Health of the Earth Using the Theory of Island Biography
    This module uses a variety of available datasets to explore methods of calculating biodiversity and measuring landscape as well as the relationship between those.

    Keywords: moduleEvolutionecologycollege algebraearth scienceOceanographygeophysicalResources @ DIMACSResources @ QUBES - Teaching & Reference

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    An Introduction to Statistical Learning: with Applications in R
    This book provides an introduction to statistical learning methods and is aimed for upper level undergraduate students, masters students and Ph.D. students in the non-mathematical sciences.

    Keywords: linear regressiontextbookclassificationcourseclustering coefficientR programming languagestatistical learningmachine learninglogistic regressionresamplingmodel selectionGeneralized additive modelsdecision treesprincipal components analysisMOOCResources @ QUBES - Teaching & Reference

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    A Very Basic Tutorial for Performing Linear Mixed Effects Analyses: Tutorial 2
    The second of two tutorials that introduce you to linear and linear mixed models. This tutorial serves as a quick boot camp to jump-start your own analyses with linear mixed effects models.

    Keywords: statisticsRdata analysisgraphingconceptsstatsregressionmixed modelslinear modelsfixed effectsrandom effectsintroductionResources @ QUBES - Teaching & Referencetechnologytutorial 2boot campbeginner

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    BioNumbers-the database of key numbers in molecular and cell biology
    BioNumbers is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of interest to computational, systems and molecular cell biologists

    Keywords: dataResources @ BioNumbersNumbersestimationdatabaseResources @ QUBES - Teaching & Reference

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    BioNumbers: The Database of Useful Biological Numbers
    A database of biological numbers that you can search and browse.
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    Figure of the Day - Ecology additions
    Used in an Integrated Biological Principles II Class (Intro to Ecology/Evolution/Physiology) at University of Richmond

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting GraphsFigure of the Day

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    Number Sense
    In this activity, students demonstrate their own innate number sense by playing an online game that asks them to estimate quantities that are flashed on screen for only milliseconds. Research...

    Keywords: number sensemath attitudesResources @ BIOMAAP

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    Figure of the Day
    Students use their number sense to make observations and come up with reasonable guesses or explanations for the patterns shown.

    Keywords: graphsmath attitudesResources @ BIOMAAPInterpreting Graphs

    3578

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    IPMpack: an R package for Integral Projection Models
    IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models.

    Keywords: RR-Forgeanimalbiostatisticscomparative analysisecologylongitudinal datamodel comparisonmodel estimationprojectionssurvivaltime seriestrajectoryIPMintegral projection modelsResources @ QUBES - Software

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