You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Thinking deeply about quantitative analysis: Building a Biologist's Toolkit
    Vision and Change in Undergraduate Biology Education encouraged faculty to focus on core concepts and competencies in undergraduate curriculum. We created a sophomore-level course, Biologists'...

    Keywords: Vision and ChangeRRStudioquantitative literacystatistical analysisScientific communication

    766

    views

    189

    downloads

    0

    comments

    0

    adaptations

    Riverbird distributions and habitat use
    Riverbirds are widespread, use diverse riparian habitats, and respond rapidly to changing conditions. Students can apply riverbird data to evaluate hypotheses about these responses, while gaining...

    Keywords: logistic regressionHabitat selectionRiver Field Studies NetworkWaterfowl raptorkingfisherheronfocal speciesmonitorriverbank

    387

    views

    31

    downloads

    0

    comments

    0

    adaptations

    Statistics with epidemiology of COVID-19
    Introduction into heat maps, non-parametric t-test and GIF (optional) in R using an original dataset on COVID-19 infections from different counties of New Jersey, USA. Suitable for students who...

    Keywords: Rundergraduate educationheat mapsCOVID19coronavirusSARS-CoV-2GIF

    1504

    views

    521

    downloads

    0

    comments

    0

    adaptations

    2015-Eric_Sullivan-Numerical Methods_An_Inquiry-Based_Approach_with_Python
    This is an OER effort on the part of Eric Sullivan to explore the joy of numerical methods. He has provided several versions.

    Keywords: pythonnumerical analysisNumerical Methods

    371

    views

    73

    downloads

    0

    comments

    0

    adaptations

    Statistics for Biologists
    There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late.

    Keywords: statisticsdata analysisexperimental design

    954

    views

    192

    downloads

    0

    comments

    0

    adaptations

    How to create "funny symbols" (aka math / statistical notation) in Microsoft Word / Office
    YouTube video on using statistical notation in Microsoft Word.

    Keywords: videosonline learninggenomicsyoutubestatistics symbols

    1576

    views

    234

    downloads

    0

    comments

    0

    adaptations

    Applying phylogenetic tree building in MEGA X to forensic applications for identifying unknown specimens
    This exercise is designed to guide a learner through the construction of phylogenetic trees as a means of addressing research questions in forensic science such as the identification of previously...

    Keywords: taxonomyBioinformatics and GenomicsDNA Barcodinginvertebrate phylogeneticsforensic entomology

    1748

    views

    575

    downloads

    0

    comments

    0

    adaptations

    Learning to Pipet Correctly by Pipetting Incorrectly?
    Beginning undergraduate students in biology need basic laboratory, data analysis, and science process skills to pursue more complex questions in course-based undergraduate research experiences...

    Keywords: statisticslaboratorypipetting

    3920

    views

    270

    downloads

    0

    comments

    0

    adaptations

    2-001-NumericalMethodsComparisons-TechniqueNarrative
    This material teaches the basics of numerical methods for first order differential equations by following graphical and numerical approaches. We discuss the order of accuracy of the methods and...

    Keywords: Euler's methodimproved Euler's methodRK3 methodsRK4 methodsorder of accuracyabsolute errorCPU time

    348

    views

    146

    downloads

    0

    comments

    0

    adaptations

    Java Applets for Power and Sample Size
    This is a Java application that allows you to do power and sample-size calculations for a number of standard statistical models.

    Keywords: statisticspowerstatistical powersample sizeeffect sizestatistical tests

    1576

    views

    588

    downloads

    0

    comments

    0

    adaptations

    5-005-StiffDifferentialEquations-TechniqueNarrative
    This material introduces the topic of ``stiffness'' for a system of ordinary differential equations (ODE's), through a series of examples. Stiffness is a property that a system of ODE's may...

    Keywords: Euler's methodexplicit methodsimplicit methodsstiffsitffnessstiff differential equationinstability

    452

    views

    483

    downloads

    0

    comments

    0

    adaptations

    BioVEDA Curriculum: An Approach to Link Conceptual and Quantitative Understanding of Variation During Experimental Design and Data Analysis
    When performing a biological investigation, experts constantly cycle between conceptual and quantitative modes of thinking, integrating their understanding in both worlds to make decisions about...

    Keywords: statisticssample sizeBiological variation

    1849

    views

    570

    downloads

    0

    comments

    0

    adaptations

    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

    1789

    views

    2325

    downloads

    0

    comments

    0

    adaptations

    MathBench: Evolved Immunity for Introductory Environmental Science
    The Evolved Immunity module was the focal module for this lesson. Evolved Immunity was chosen because this module includes content and quantitative elements from a range of lab and lecture topics...
    916

    views

    470

    downloads

    0

    comments

    0

    adaptations

    Building Trees: Introducing evolutionary concepts by exploring Crassulaceae phylogeny and biogeography
    Teaching evolutionary theory is foundational for all biological sciences and a key aspect of overall science literacy. The conceptual framework for understanding evolution relies on thinking...

    Keywords: EvolutionphylogeneticsTree thinkingbiogeography

    2662

    views

    988

    downloads

    0

    comments

    0

    adaptations

    Teaching biostatistics using the Rule of Four
    A guide to helping intro bio students develop a deeper understanding of key statistical concepts by translating among numeric, graphical, verbal, and symbolic representations.

    Keywords: statisticsbiostatisticsintroductory biologyQuantitative reasoningBIOME 2022

    366

    views

    116

    downloads

    0

    comments

    0

    adaptations

    Data Analysis for the Life Sciences
    An online stats book written completely in R

    Keywords: Rbiostatisticsstatistical analysisR Markdown

    1299

    views

    383

    downloads

    0

    comments

    0

    adaptations

    1-060-RegularPerturbation-TechniqueNarrative
    This paper presents an introduction to a set of analytical approximations referred to as regular perturbation. This is a particular mathematical tool within the broader set of perturbation...

    Keywords: perturbationregular perturbationasymptotic expansionsanalytical approximationBernoulli equation

    180

    views

    245

    downloads

    0

    comments

    0

    adaptations

    2007-Helfgott-Seier-Some Mathematical and Statistical Aspects of Enzyme Kinetics
    We will analyze some basic ideas behind enzyme kinetics, which allow us to deal with separable and linear differential equations as well as realize the need to use power series.

    Keywords: kineticsEnzymeexperimental dataregresion

    176

    views

    56

    downloads

    0

    comments

    0

    adaptations

    Statistics Overview
    A Numbers Count statistics diagram

    Keywords: statisticsNumbers Count

    1393

    views

    329

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search