You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    2003-Rasmussen-Keynes-Lines of Eigenvectors and Solutions to Systems of Linear Differential Equations
    The purpose of this paper is to describe an instructional sequence where students invent a method for locating lines of eigenvectors and corresponding solutions to systems of two first order linear...

    Keywords: instructional designeigenvalueseigenvalue analysis

    139

    views

    41

    downloads

    0

    comments

    0

    adaptations

    2014-Chivers-EtAl-Predator-prey systems depend on a prey refuge
    We present an agent-based model which does not require the factors or constraints of previous models to reproduce all six patterns in persistent populations.

    Keywords: Individual & Agent Based Modelingpredator-preythink-pair-shareslynxrefugeprey switchingMustela-Clethrionomys systempatter oriented

    152

    views

    39

    downloads

    0

    comments

    0

    adaptations

    1996-D_Erdman-MM_Morelock-A Study of Kinetics
    This paper introduces new and old features of the SAS System for the estimation and simulation of systems of first-order differential equations with emphasis on examples in kinetics.

    Keywords: simulationkineticsparameter estimationEnzymesubstratesavingscompartmentstomachbloodginseng

    160

    views

    43

    downloads

    0

    comments

    0

    adaptations

    1977-Michael_Mackey-Leon_Glass-Oscillation and Chaos in Physiological Control Systems
    First-order nonlinear differential-delay equations describing physiological control systems are studied. The equations display a broad diversity of dynamical behavior including limit cycle...

    Keywords: sensitivitychaosparametersRespirationdelayblood cells

    158

    views

    56

    downloads

    0

    comments

    0

    adaptations

    5-005-StiffDifferentialEquations-TechniqueNarrative
    This material introduces the topic of ``stiffness'' for a system of ordinary differential equations (ODE's), through a series of examples. Stiffness is a property that a system of ODE's may...

    Keywords: Euler's methodexplicit methodsimplicit methodsstiffsitffnessstiff differential equationinstability

    453

    views

    483

    downloads

    0

    comments

    0

    adaptations

    Biometeorology of Asthma in South Florida: From Statistical Analysis to Mathematical Modeling
    Part of the 2015 SMB Minisymposium: Topics in Biomathematics Education

    Keywords: data analysisdynamical systemsmathematical modelingsynchronizationasthmaimmune systemcomplex systemsfeedback loopsself-organized criticalitychaos

    1551

    views

    190

    downloads

    0

    comments

    0

    adaptations

    The Pipeline CURE: An Iterative Approach to Introduce All Students to Research Throughout a Biology Curriculum
    Participation in research provides personal and professional benefits for undergraduates. However, some students face institutional barriers that prevent their entry into research, particularly...

    Keywords: epigeneticsundergraduate researchmendelian inheritanceSelf-EfficacyCUREsnature of scienceResiliencecurriculum strategiesreprogramming

    2566

    views

    256

    downloads

    0

    comments

    0

    adaptations

    From Cre/LoxP to Fate Maps: Inclusive and Equitable Approaches for Engaging Developmental Biology Students in Experimental Design
    Engaging first generation underrepresented minority students in the process of inquiry in developmental biology is important to increase diversity in future graduate STEM education. One important...

    Keywords: experimental designC. elegansCre/LoxPFate mapheart developmentheart regenerationmousereporter constructzebrafish

    904

    views

    175

    downloads

    1

    comments

    0

    adaptations

    2006-Michael_Coleman-Population Modeling with Ordinary Differential Equations
    We will investigate some cases of differential equations population models beyond the separable case and then expand to some basic systems of ordinary differential equations.

    Keywords: population dynamics

    132

    views

    38

    downloads

    0

    comments

    0

    adaptations

    Concept mapping exercise for ecological news story and peer feedback
    This activity is designed for small groups to work together in class to create a concept map based upon an ecological news story. Any short news story can be selected. One is provided here, along...

    Keywords: ecologysystems thinkingconcept mappingpeer feedbackin-class exercise

    288

    views

    74

    downloads

    0

    comments

    0

    adaptations

    Aquatic Nutrient Levels and Climate Change
    This learning module was designed to introduce students to the aquatic nutrients nitrogen and phosphorus, their roles in ecosystem function and nutrient pollution, and what impacts climate change...

    Keywords: climate changenitrogenwater resourcesfreshwater systemsEutrophicationwater qualitynutrient pollutionphosphorusdischargeTMDL

    1356

    views

    1255

    downloads

    0

    comments

    0

    adaptations

    Natural Hazards and Risks: Hurricanes
    Making the difficult decision to evacuate before a hurricane makes landfall can save lives and property. This two week module explores how hurricanes connect the ocean-atmosphere-terrestrial...

    Keywords: sustainabilityearth scienceOceanographyenvironmental scienceglobal changenatural hazardsatmospheric scienceResources @ InTeGrate

    1602

    views

    245

    downloads

    0

    comments

    0

    adaptations

    Healing the scars: A tropical rainforest carbon cycling module implemented in a Systematic Botany course focused on the Brazilian Caatinga flora
    This resource describes my experience in implementing this OCELOTS module on tropical rainforest carbon cycling in a Systematic Botany course for undergraduate majors in Biology at Pernambuco...

    Keywords: carbon cyclePlant systematicsCaatingaTropical trees

    260

    views

    129

    downloads

    0

    comments

    0

    adaptations

    SOAR - San Francisco Bay Research Coordination Network for Student Opportunities in Avian Research to enhance STEM education and assess human impacts on avian biodiversity (RCN-UBE Introduction)
    The San Francisco Bay Research Coordination Network for Student Opportunities in Avian Research (SOAR) brings together faculty, students, and volunteers to implement an experiential learning and...

    Keywords: RCN-UBE Introduction

    357

    views

    66

    downloads

    0

    comments

    0

    adaptations

    Discovering Prokaryotic Gene Regulation with Simulations of the trp Operon
    The trp operon exemplifies important biological concepts, including the central dogma of molecular biology, feedback inhibition, and gene regulation. For this reason, regulation of the trp operon...

    Keywords: prokaryotesgene regulationattenuationfeedback inhibitionrepressible operontrp operon

    3648

    views

    383

    downloads

    0

    comments

    0

    adaptations

    Three Research-Based Quantitative Reasoning Modules for Introductory Organismal Biology Laboratories
    We have designed three laboratory modules for an introductory organismal biology course with an emphasis on quantitative reasoning and data analysis skills. Module 1 tests for dimorphism in...

    Keywords: allometryplantsAnatomytranspirationdimorphisminvertebrate biologyarthropodsplatyhelminths

    3551

    views

    176

    downloads

    0

    comments

    0

    adaptations

    Isolation and Functional Analysis of a Pancreatic Enzyme in an Introductory Student Lab
    Structure and function are correlated at all levels of biology. This topic is typically addressed early in an undergraduate class in general or molecular biology before students have gained much...

    Keywords: Protein StructureproteaseEnzymechemical bondscatalysissolubility

    3701

    views

    190

    downloads

    0

    comments

    0

    adaptations

    Investigating Gene Expression and Cell Specialization in Axolotl Embryos
    The process of cell specialization is critical to the formation and function of tissues in animals and plants. Although gene expression, including the regulation of transcription, is taught in most...

    Keywords: developmenttranscriptiongene expressionmodel organismembryo

    1460

    views

    315

    downloads

    0

    comments

    0

    adaptations

    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    Next-generation sequencing is radically changing the study of biology, but there are currently few resources aimed at teaching the required laboratory and data-analysis skills to undergraduate...

    Keywords: statisticsbioinformaticsRNAseqgene expressioncomputer programming

    3408

    views

    565

    downloads

    0

    comments

    0

    adaptations

    Using Synthetic Biology and pClone Red for Authentic Research on Promoter Function: Introductory Biology (identifying new promoters)
    Students often memorize the definition of a transcriptional promoter but fail to fully understand the critical role promoters play in gene expression. This laboratory lesson allows students to...

    Keywords: bacteriasynthetic biologygene regulationtranscriptionstudent researchcentral dogmacloningpromoterreporter gene/protein

    2766

    views

    575

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search