You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Fatty Acid Induction of Lipid Droplets in Cancer Cells
    There is a growing need for the development and communication of cell culture-based laboratory activities specifically designed for undergraduate students. This multi-week laboratory activity...

    Keywords: Course based undergraduate researchCell ImagingLive Cell Staining

    986

    views

    140

    downloads

    0

    comments

    0

    adaptations

    Taking the Hassle out of Hasselbalch
    Mention pH in a classroom and you can almost see the inner yawn on the faces of your students. The definition may even roll easily from their lips. However, despite multiple exposures to the...

    Keywords: pHdrug uptakeHenderson-Hasslbalch equationmedical applicationspKa

    1487

    views

    355

    downloads

    0

    comments

    0

    adaptations

    1-005-OilSlick-ModelingScenario
    We describe a modeling activity with difference and differential equations which enlightens students on the model building process and parameter estimation for a linear, first-order,...

    Keywords: model fittingspreadsheetsSpanishderrame de petróleodatosexpansiónoil slick

    1090

    views

    3551

    downloads

    0

    comments

    0

    adaptations

    1-064-TorricelliBox-ModelingScenario
    The time it takes a column of water to empty and the time it takes the same volume of column of water with a box (various sizes) submerged in the column of water are compared through modeling with...

    Keywords: groundwater flowcolumn of waterTorricelli's Lawwater displacementsubmerged box

    207

    views

    109

    downloads

    0

    comments

    0

    adaptations

    3-040-FirstPassageTime-ModelingScenario
    We apply the notions of dampedness to second order, linear, constant coefficient, homogeneous differential equations used to model a spring mass dashpot system and introduce the notion of first...

    Keywords: oscillatordampedunderdampedfirst passagefirst passage timespring mash dashpot

    173

    views

    96

    downloads

    0

    comments

    0

    adaptations

    Liberating Data for Biodiversity Research
    The objectives of this exercise are to familiarize you with the information content of biodiversity specimens and their labels, the breadth of that information across geographic space and/or time.

    Keywords: Biodiversitynatural history collectionsBLUEresearch specimensbiodiversity dataspecimen labels

    1600

    views

    552

    downloads

    0

    comments

    0

    adaptations

    CRISPR/Cas9 in yeast: a multi-week laboratory exercise for undergraduate students
    Providing undergraduate life-science students with a course-based research experience that utilizes cutting-edge technology, is tractable for students, and is manageable as an instructor is a...

    Keywords: bioinformaticsPCRphenotypingCRISPR/Cas9gene editingcloningGenotypingRestriction enzyme

    3069

    views

    1093

    downloads

    0

    comments

    0

    adaptations

    3-044-DeepWell-ModelingScenario
    We drop a pebble in a deep well. Given the time elapsed from release of the pebble until we hear the splash determine the depth of the well.

    Keywords: gravityprojectile motionfalling bodyspeed of sound

    243

    views

    155

    downloads

    0

    comments

    0

    adaptations

    6-067-LotkaVolterra-ModelingScenario
    This modeling scenario guides students through the process of fitting the Lotka-Volterra model of two differential equations to a real time series observational data. Students use the capabilities...

    Keywords: time seriesdatacompetitionLotka-Volterramodel fittingpredictiongauseRexperimental

    351

    views

    95

    downloads

    0

    comments

    0

    adaptations

    2019-Stender_EtAl-Recovery_Of_Differential_Equations_From_Impulse_Response
    In this work, a recent method, which allows reconstructing differential equations from time series data, is extended for higher degrees of automation.

    Keywords: time seriesregressionresponseimpulseoscillationsignal processingsparse regressionsystem identification

    767

    views

    39

    downloads

    0

    comments

    0

    adaptations

    1999-Leonid_Hanin-Which tank empties first
    Suppose that water towers like those shown in the opening are initially filled with water and have the same volume, height, and cross-sectional outlet area. Which one empties first?

    Keywords: tankTorricelli's Lawspherical tankemptyfrustrum of conecylinder

    84

    views

    31

    downloads

    0

    comments

    0

    adaptations

    Application of a Bacterial Experimental Evolution System to Visualize and Teach Evolution in Action: A Course-Based Undergraduate Research Experience
    Concepts of evolution are typically taught through examples of extremely long timescales, which do not always resonate broadly. Here, we describe a course-based undergraduate research experience...

    Keywords: EvolutionmutationcompetitionNatural Selectionregulationstructure and functionreproductive fitnessgenotype to phenotypehomologs

    3072

    views

    246

    downloads

    0

    comments

    0

    adaptations

    1-052-SaltWaterTanks-ModelingScenario
    We offer three mixing problems, of increasing order of difficulty, in which salt is coming into a tank of water and upon instantaneous mixing is leaving the tank.

    Keywords: salttankmixing

    222

    views

    204

    downloads

    0

    comments

    0

    adaptations

    2012-Hassan_Moore-Using projects to stimulate learning in mathematics and engineering mathematics courses
    Given that time is a premium in the academy and project creation is a time consumer, three original projects, which may be injected into any Calculus III, Differential Equations, or Engineering...

    Keywords: solutionsclass projectsphysical phenomenon

    235

    views

    43

    downloads

    0

    comments

    0

    adaptations

    2008-Brewer-EtAl-Fitting ordinary differential equations to short time course data
    In this paper, we present a survey of existing algorithms and describe the main approaches. We also introduce and evaluate a new efficient technique for estimating ODEs linear in parameters...

    Keywords: time seriesEvaluation SPLINEgeneleast squaresbifurcation

    89

    views

    37

    downloads

    0

    comments

    0

    adaptations

    2012-Yuan_Yuan-A coupled plankton system with instantaneous and delayed predation
    We present two simple plankton population models: one has instantaneous predation, another has delayed predation.

    Keywords: phytoplanktonbifurcationorbitsherbivorous zooplanktoneffect of fishmaturation time delay

    110

    views

    35

    downloads

    0

    comments

    0

    adaptations

    Fruit Fly Genetics in a Day: A Guided Exploration to Help Many Large Sections of Beginning Students Uncover the Secrets of Sex-linked Inheritance
    Moving beyond the basic concepts of autosomal Mendelian inheritance to sex-linkage can be difficult for introductory biology students. Although crosses with Drosophila fruit flies have long been a...

    Keywords: Mendelian Geneticsfruit fly biologysex-linked inheritance

    2857

    views

    856

    downloads

    1

    comments

    0

    adaptations

    2005-Minna_Wedenberg-Pharmacokinetic modeling of gastric emptying
    The development of new drug substances is a complex, time consuming and expensive process. Reducing the time for drug development and avoiding late termination of candidate drugs are important...

    Keywords: paracetamolpharmacokineticsstomachsmall intestinesulfapyridine

    109

    views

    37

    downloads

    0

    comments

    0

    adaptations

    A Rapid Genetic Screen Using Wisconsin Fast Plants®: A Hands-On Approach to Inheritance of de novo Mutations
    Some concepts in genetics, such as genetic screens, are complex for students to visualize in a classroom and can be cumbersome to undertake in the laboratory. Typically, very large populations are...

    Keywords: mutationInheritancegermlinesomaplant lifecycle

    2179

    views

    145

    downloads

    0

    comments

    0

    adaptations

    Understanding Host-Pathogen Interactions With the Use of Galleria mellonella
    The Galleria mellonella; the larvae of the Greater Wax Moth, is a safe and effective means to study host-pathogen interactions in the undergraduate setting. The use of animal models in the teaching...

    Keywords: innate immunitybacterial pathogenesisHost-pathogen interactionsGalleria mellonellaVirulence

    1493

    views

    292

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search