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    Using genomic data and machine learning to predict antibiotic resistance: a tutorial paper
    Antibiotic resistance is a global public health concern. Bacteria have evolved resistance to most antibiotics, which means that for any given bacterial infection, the bacteria may be resistant to...

    Keywords: Tutorialmachine learningantibiotic-resistanceArtificial Intelligence

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    Defining Life: Exploring Creativity, Scientific Discovery, and Biology Core Concepts in a Disciplinary First-Year Seminar
    This unit, Defining Life, engages students in thinking like scientists, applying creativity to science, and learning biology core concepts as they explore the defining characteristics of life. This...

    Keywords: Evolutionbiologycellprocess of science

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    Cell Cycle and Mitosis
    This module introduces activities that allow students to walk through the cell cycle and mitotic cell division processes. As part of the activities, students learn about and apply knowledge of...

    Keywords: introductory biologyQuantitative reasoningInterdisciplinary STEMquantitative biologyinterdisciplinaryquantitative skillscell functioncell cyclemitosisCell DivisionMitotic Indexcalculating meanstumorNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical Analysisstandard errormitotic phaseinterphase

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    Introduction to the Fculty Resource Guide: Integrating Social Justice, Diversity, Equity and Inclusion Issues in STEMM courses
    We live in challenging times. Higher education faces many challenges including changes in enrollment pattern, fiscal constraints and lack of public acceptance of the value of the degree relative to...

    Keywords: social justiceDEI statementsTeaching Controversial Issues

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    3-051-ProjectileMotions-ModelingScenario
    We consider several instances of projectile flight without resistance, one on level ground and one from edge of cliff to determine maximum distance and placement.

    Keywords: trajectorylaunching radiantprojectile motionprojectileno resistanceangle of launch

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    3-052-OptimalProjectileFiring-ModelingScenario
    We offer the opportunity to model a projectile's trajectory in several cases, all without resistance.

    Keywords: projectile motionprojectilelaunch anglemaximum range

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    Data-Driven Decision-Making: Antarctic Fisheries
    This is an entire module for a general education data science and ecology course. The module was originally designed as the fourth and final section of the course; the full course is openly...

    Keywords: population growthRStudiodata visualizationexponential growthlogistic growthR Markdownspatial dataocean sustainability4DEE FrameworkTraditional ecological knowledgecarrying capacityEcosystem Servicesmaximum sustainable yield

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    A Structured Inquiry-Based Module for the Undergraduate Cell Biology Laboratory That Teaches Fundamental Concepts of Cell Differentiation
    Pedagogical research in science education has shown that students effectively learn science by doing science. As a result, there is increased interest in bringing research-like experiences into the...

    Keywords: fluorescence microscopygene expressionpolymerase chain reactionCell Structurecell culturewestern blottingdifferentiationreverse transcription

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    Exploring Microbial Diversity: An Interactive In-Class Assignment for Biology and Microbiology Courses
    This interactive assignment engages students in a hands-on exploration of microbial diversity and the importance of microbes in ecosystems. Designed for General Biology II and Introduction to...

    Keywords: Microbiology EducationMicrobial DiversitymicrobiologyEcological Society of Americaecology educationresearch-based classroom instruction4DEE Framework

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    Teaching Thermal Physiology of Reptiles and Amphibians to Undergraduate Students
    This module contains materials and activities for teaching undergraduate students about the thermal physiology of reptiles and amphibians. The module begins with an interactive lecture introducing...

    Keywords: animalecologyconservationclimate changeHerpetologyUndergraduatephysiologyTemperature ChangeAmphibans and ReptilestemperatureMetabolismsnakesdigestive systemreptileslizardcrticial thermal maximumthermoregulation

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    BEDE Network Data Science Skills Curriculum Map
    The Biological and Environmental Data Education (BEDE) Network has produced this data science skills curriculum map as a flexible tool to help instructors highlight data science skills that they...

    Keywords: quantitative skillsscientific literacyCurriculum developmentdata science skills trainingdata literacy skills

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    The Great Petunia Carnage of 2017: A Clicker Case Study Using Petunias to Describe the Effect of Genetic Modification on the Biochemistry of Flower Color and Phenotype in Plants
    In this single class period case study, students examine the difference between genotype and phenotype by studying the mechanisms by which commercially available petunias have been bred to have...

    Keywords: case studyGenetic ModificationsBiochemistry of Flower ColorGMO regulationsGenotype-Phenotype Connections

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    Learning the Landscape: An Active and Applied Lesson on Landscape Ecology for General Ecology Courses
    Landscape ecology is an important subtopic of ecology. As a field, it is inherently interdisciplinary and provides opportunities to teach not only content, but transferable ecological and...

    Keywords: landscape ecologyspatial scaleecosystem managementHabitat fragmentation

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    1-144-HeatCool-ModelingScenario
    We offer an opportunity to build a mathematical model using Newton's Law of Cooling for a closed plastic baggie of liquid inside a liquid container.

    Keywords: temperatureNewton's Law of Coolingcooling

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    Navigating Bacterial Changes in Aging Organisms: Graphs, Patterns, and Models
    Aging is an incredibly important area of research, and recent biological advances implicate the intestines in aging pathologies. Given that the gut harbors an immense amount of an organism’s...

    Keywords: statisticsgraphingmathematics for life sciencesmathexponential growthPrecalculus

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    1-131-CaffeineElimination-ModelingScenario
    We model the concentration of caffeine eliminated from the human body at a rate proportional to the concentration. This is a ``first-order reaction'' in the language of pharmacokinetics -- the...

    Keywords: caffeineeliminationpharmacokineticsdrug

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    Implementing an online module about interpreting sound in a coral reef for an undergraduate marine biology course in Indonesia
    Students engage in interpreting sound, exploring the diversity of sounds in a coral reef in Indonesia, and relating coral reefs to climate change. This implementation incorporated principles of...

    Keywords: fishcoral reefssoundscapestropical ocean

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    PhyloCards: a fun approach to exploring the local Wissahickon biodiversity, Chestnut Hill, Philadelphia, PA
    PhyloCards are educational trading cards that teach people about biodiversity, conservation, and ecosystem relationships. We used this educational tool to explore the Wissahickon Valley's...

    Keywords: species richnessPokemon Gobiodiversity literacytrophic chain

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    Using Constructed Response Questions on High-Stakes Assessments in Large Classes With Limited Support
    Large lecture courses often rely heavily, and sometimes exclusively, on Multiple Choice (MC) exams to assess student learning. Constructed Response (CR) questions, in which students generate their...

    Keywords: assessmenttestexamLarge classconstructed responseshort answerscoring

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    Using Raw Sequence Data to Analyze Tumor Suppressor Mutations
    Learning to identify DNA sequence variants from raw sequencing data (electropherograms) is a basic molecular biology skill with applications to basic research and clinical practice. Yet learning to...

    Keywords: bioinformaticsmutationDNAgenomic visualizationparts of a geneclinical consequencesraw data

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