Resources: Models
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- Published on Thursday, 13 August 2015 06:47
Resources: Models
Models
An abstract model of a biological process: could be mathematical, statistical, or computational.
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Featured Models
Fitzhugh-Nagumo
FitzHugh R. (1961) Impulses and physiological states in theoretical models of nerve membrane. Biophysical J. 1:445-466
Nagumo J., Arimoto S., and Yoshizawa S. (1962) An active pulse transmission line simulating nerve axon. Proc IRE. 50:2061–2070.
Model pageRelevant Links
The 'ODD' (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based models (ABMs). The primary objectives of ODD are to make model descriptions more understandable and complete, thereby making ABMs less subject to criticism for being irreproducible.
- We introduce TRACE, a framework for documenting model testing and analysis.
- TRACE is based on the recently proposed framework of model “evaludation”.
- We provide a template for TRACE and three example TRACE documents.
- TRACE is designed to make models fit for supporting environmental decision making.