You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Finding Selection in All the Right Places
    Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource

    Keywords: geneticsbioinformaticssequencingNIBLSE

    1300

    views

    316

    downloads

    0

    comments

    0

    adaptations

    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    This lesson plan was created to teach RNAseq analysis as a part of GCAT-SEEK network. It is provided here, both in finished form and with the modifiable source code, to allow flexible adaptation to...

    Keywords: statisticsR programming languagebioinformaticsNIBLSERNAseqgene expressionCourseSourcecomputer programming

    1969

    views

    525

    downloads

    0

    comments

    0

    adaptations

    Cell Cycle and Mitosis
    This module introduces activities that allow students to walk through the cell cycle and mitotic cell division processes. As part of the activities, students learn about and apply knowledge of...

    Keywords: introductory biologyQuantitative reasoningInterdisciplinary STEMquantitative biologyinterdisciplinaryquantitative skillscell functioncell cyclemitosisCell DivisionMitotic Indexcalculating meanstumorNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical Analysisstandard errormitotic phaseinterphase

    346

    views

    241

    downloads

    0

    comments

    0

    adaptations

    The Stomata Lab. What the past can tell us about our future - using fossil and modern plants to model atmospheric carbon dioxide
    Students will develop a mathematical model of the relationship between atmospheric CO2 and the number of stomata on a leaf (Stomata Index). They will evaluate the model graphically, statistically,...

    Keywords: introductory biologyQuantitative reasoninginterdisciplinaryclimate changeregressionEcology and EvolutionStomataNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical AnalysisSmithsonian

    1757

    views

    302

    downloads

    0

    comments

    0

    adaptations

    Using the Hardy-Weinberg Equations: Quantifying Natural Selection and Allele Frequencies
    This module contains exercises designed to walk students through a real-world example of the coevolution of fruit color and primate frugivore color vision. Students will apply the Hardy-Weinberg...

    Keywords: Hardy-WeinbergEvolutionintroductory biologyQuantitative reasoninginterdisciplinaryNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical AnalysisC6. Quantitative LanguageC1. Numeracy

    620

    views

    463

    downloads

    0

    comments

    0

    adaptations

    The Edge Effect
    This module has students venturing outdoors to take a 50m transect and collect abundance data on plants utilizing quadrats in both edge and interior environment. Mathematically the goals of this...

    Keywords: statisticsecologydata analysisExcelintroductory biologygraphingp-valuest-testsQuantitative reasoninghypothesis testingsample sizestatistical testsinterdisciplinarystatistical analysisCommunity Ecologyspecies diversityvariationdiversity indexvinterpret dataNIQBShannon diversity indexC3. Statistical AnalysisC6. Quantitative Languageedge effect

    563

    views

    433

    downloads

    0

    comments

    0

    adaptations

    Infectious Chocolate Joy with a Side of Poissonian Statistics: An activity connecting life science students with subtle physics concepts
    Lesson on what it means for biological processes to be Poissonian, published in CourseSource

    Keywords: quantitative biologybioinformaticsmicrobiologyphysicsNIBLSEHIVCourseSourcemultiplicity of infectionPoisson Distribution

    1373

    views

    284

    downloads

    0

    comments

    0

    adaptations

    A Hands-on Introduction to Hidden Markov Models
    A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.

    Keywords: Markov modelbioinformaticsgenomicsNIBLSEtranscriptionCourseSourceexonintronsplicing

    1453

    views

    371

    downloads

    0

    comments

    0

    adaptations

    The Human Microbiome Biodiversity in Health and Disease
    The students will analyze the human gut and vaginal microbiomes in healthy and diseased states using diversity of bacteria as determined by 16SrRNA sequence.
    1129

    views

    773

    downloads

    0

    comments

    0

    adaptations

    Transpiration
    In this lab, students will examine differences between C3 and C4 plants in their transpiration rates.

    Keywords: plant physiologybotanylaboratoryResource Type

    1400

    views

    334

    downloads

    0

    comments

    0

    adaptations

    The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior. An introduction to statistical analysis in animal behavior research
    Students investigate the role of olfaction and infochemicals on bird foraging behavior through two different quantitative activities where they generate hypotheses, create figures, conduct data...

    Keywords: Resources @ ESA - TIEEforagingfmnanimal behaviorbehavioral ecologyDIGtrophic cascades

    1648

    views

    2365

    downloads

    0

    comments

    0

    adaptations

    Module M.8 Survival analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    422

    views

    162

    downloads

    0

    comments

    0

    adaptations

    Exploring EnvironmenATL Justice with Data Analytics and Visualization
    Basic data handling and data analysis skills are introduced to visualize and analyze ‘big data.’ Environmental justice is introduced to give students an understanding of tools and strategies to...

    Keywords: social justiceenvironmental justiceatlantaHBCUsCulturally responsive science teachingenvironmental racismenvironmental injustice

    1544

    views

    4501

    downloads

    0

    comments

    0

    adaptations

    Module M.4 Simple linear regression analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    839

    views

    429

    downloads

    0

    comments

    0

    adaptations

    Island biogeography, spatial ecology, and macroinvertebrate species diversity in Richmond’s rock pools
    Students investigate questions of community ecology and biogeography using data from an urban rock pool ecosystem. Using ArcGIS 10, students learn to create effective maps, calculate landscape...

    Keywords: aquatic macroinvertebratesCommunity Ecologyspecies diversityGeographic Information System (GIS)spatial analysisJames River

    2692

    views

    1644

    downloads

    0

    comments

    0

    adaptations

    Is everything bigger in Texas? Introduction to Statistics with the Rock Pocket Mouse (Chaetodipus intermedius)
    Natural history museums often contain large collections of the same species and therefore, are a resource for studying intraspecific variation. This module uses 172 images of rock pocket mouse...

    Keywords: statisticsnatural history museumsdistance learningStudy Designintraspecific variation

    750

    views

    261

    downloads

    0

    comments

    1

    adaptations

    Intro to Data Types and Graphing Lab
    This is the third lab in an Introductory Physical Geography/Environmental Studies course. It introduces students to different data types (qualitative vs quantitative), basic statistical analyses...
    2324

    views

    2622

    downloads

    0

    comments

    0

    adaptations

    DCS 105 Calling Bull F24 Schedule
    Schedule overview for Bates College Course DCS 105 Calling Bull

    Keywords: datacalling bullmisinformationBates CollegeSchedule

    184

    views

    58

    downloads

    0

    comments

    0

    adaptations

    Calling Bullshit DCS 105 Bates College RByte Worksheets
    These are handout worksheets for your in-class RByte activities.

    Keywords: RActivityGoogle CoLabCalling BullshitRByteData PracticeCoding SkillsSkill development

    277

    views

    244

    downloads

    0

    comments

    0

    adaptations

    Paleoclimate and Ocean Biogeochemistry (Project EDDIE)
    This module guides students in an examination of how surface ocean productivity relates to global climate on glacial-interglacial timescales and how the availability of ocean nutrients can be...

    Keywords: Oceanographydata literacyocean productivity

    467

    views

    188

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search