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    Hidden Markov Model
    Hidden Markov models are a set of mathematical tools that can be used to draw inferences about genomic and evolutionary processes.

    Keywords: hidden markov models

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    Continuous Growth Models
    This Excel worksheet compares user-input growth data with predictions under linear, exponential, and logistic models of growth. Introduces concepts of statistical analysis that can be additionally...

    Keywords: exponential growthlogistic growthcurve fittinglinear growthgrowth models

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    The impact of diversifying and humanizing science role models on student attitudes and interest in science careers
    We introduced diverse and humanized scientist role models into data literacy instruction and quantified changes in student attitudes towards science. We found that the impact of science role models...
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    Integrating the modeling of biogeochemical cycles and energy flow
    This in-class activity challenges students to create and then integrate models of how carbon, nitrogen, water and energy all move within an ecosystem. Using 15 provided standard pools, they work...

    Keywords: modelingecologyintegration4DEE FrameworkBiogeochemical cycles

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    Using Regression Models to Examine the Effect of Carbon Dioxide on Fluid pH
    In this activity students will use statistics and regression models to explore the effects of carbon dioxide on blood pH by measuring pH changes that occur over time as carbon dioxide reacts with...

    Keywords: BiochemistryphysiologyAnatomyGeneral BiologyChoosing modelsCreate graphsInterpret graphsConcepts in Statisticscreate modelsmake predictions

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    Operon
    This Excel workbook models lac operon function in a partial diploid E. coli. The user chooses the bacterial genotype and the sugars present in the surrounding medium: the workbook then determines...

    Keywords: Lac OperonE. coli

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    Evolution Through Natural Selection
    This Excel workbook simulates the population genetics of a single gene with two alleles, allowing the user to set the initial allele frequencies and enter parameters for a variety of different...

    Keywords: population geneticsNatural Selection

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    Self-Assembling Geometric Solids Videos
    An online resource showcasing research and developments in self-assembling 3D printed models. Our collection of videos covers various aspects of the self-assembly process and novel techniques.

    Keywords: GeometricSelf-assemblysolidsPlatonicArchimedean

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    Why Cells Change Weight: Demonstrating Linear Regression Through an Osmosis Experiment
    In this activity, students will perform an experiment utilizing dialysis tubing to create cellular models to demonstrate the linear relationship between cell weight and time in varying tonicities....

    Keywords: graphingqbccCellular and Molecular BiologyInterpret graphsConcepts in Statistics

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    MathBench Population Dynamics Module Activity
    The resource accompanies the Mystery of the Missing Housefly Population Dynamics MathBench module which explores exponential and logistic growth models. Students explore the assumptions of the...
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    Leslie/Lefkovitch Matrix Models for Age or Stage-structured Populations
    This Excel workbook uses the Leslie matrix model for population projection of age-class structured populations, and also allows Lefkovitch matrix models for stage-class structured populations.

    Keywords: survivalpopulation ecologyfecundityLeslie matrixeigenvalueseigenvectorsLefkovitch matrixage-class structured populationsstage-class structured populationsreproductive value

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    SEIR simulation activity for flattening the curve
    This is a short exploration activity to introduce SIR and SEIR models without explicitly introducing differential equations. It utilizes the R package EpiDynamics and students can run the...

    Keywords: RRStudioInfectious Disease ModelingSIR modelsSIRseircovidcoronavirus

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    An introduction to population matrix models: a swirl lesson
    Students will learn how to set up a population matrix model in R and use it for demographic analysis of a population, including projecting population growth, determining lambda and the stable age...

    Keywords: population dynamicsRpopulation growthonlinedemographypopulation projection modelquantitative biologypopulation modelmatrix modelspopulation ecologyage structurepopulation biologypopulation modelingSwirlDemographic processespopulationLeslie matrix

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    RAT ATTACK! Population growth
    This module contains exercises focused on the use and interpretation of density independent and density dependent population growth models. Students build logistic and exponential growth models in...

    Keywords: modelingecologyExcelintroductory biologygraphingQuantitative reasoningdata visualizationinterdisciplinaryexponential growthlogistic growthdata managementInterpreting Graphspopulation modelingNIQBC2. Data and GraphsC4. mathematical modelsnonlinear models

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    Making Predictions with Linear Models: A Murder Mystery Case Study
    This Swirl lesson will introduce two main concepts to students: 1) the idea of uncertainty around linear slopes versus individual values and 2) predicting values using linear models.

    Keywords: data visualizationlinear modelscase study teachinguncertaintypredictionConfidence intervals

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    Module M.5 Linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    Module M.6 Generalized linear models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    Does Urbanization Favor Exotic Species?
    In this lesson, students will learn about the exotic European honeybee (Apis mellifera), and why they are considered an important pollinator. They will be prompted to think about the impacts of...

    Keywords: RStudiogeneral linear modelsAICurbanizationPoisson Distributionnative speciesHoneybeeexotic species

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    Biodiversity Conservation in Agriculture
    Biodiversity is decreasing rapidly each year and agriculture is a large contributor. In order to minimize biodiversity loss, we must study how local and landscape management in agriculture impact...

    Keywords: conservationagricultureBiodiversitybiodiversity conservationagricultural conservation

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    Digital Atlas of Ancient Life | Exploring the Diversity and History of Fossil Life
    The Digital Atlas project include field guides to fossils (including a mobile app), an online paleontology textbook, and a collection of over 500 virtual 3D models of fossil specimens.

    Keywords: Evolutionbiologyidigbiopaleontologytaxonomynatural history collectionsgeologySPNHC2020

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