You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Quantifying The Drivers and Impacts of Natural Disturbance Events – The 2013 Colorado Floods
    This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of...

    Keywords: data in the classroomdata interpretationprecipitationstream dischargePalmer Drought Severity IndexlidarEcological Disturbancedisturbance ecologyHigh School

    3103

    views

    1282

    downloads

    0

    comments

    2

    adaptations

    Data Management using National Ecological Observatory Network's (NEON) Small Mammal Data with Accompanying Lesson on Mark Recapture Analysis
    Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by estimating small mammal...

    Keywords: data managementspreadsheetssmall mammals community dynamicsNEONCapture mark-recaptureResource TypeNational Ecological Observatory Network

    9452

    views

    13898

    downloads

    0

    comments

    2

    adaptations

    Examining human impacts on tusk evolution in elephants using authentic research data
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
    2589

    views

    5382

    downloads

    0

    comments

    1

    adaptations

    Quantifying The Drivers and Impacts of Natural Disturbance Events – The 2013 Colorado Floods
    This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of...

    Keywords: ecologyundergraduate education

    1261

    views

    855

    downloads

    0

    comments

    0

    adaptations

    Exploring Health Inequities and Redlining
    For this assignment, students will investigate relationships between historic redlining data and modern statistics of human health.

    Keywords: diseasehealthsocial justicepublic healthData science for Biologistredliningchronic diseasesocial vulnerability

    1058

    views

    815

    downloads

    0

    comments

    0

    adaptations

    Climate-Induced Shifts in California Butterflies
    A module in which students generate and test hypotheses about butterfly species’ response to climate change in the Central Valley and Sierra Nevada Mountains of northern California using publicly...

    Keywords: linear regressionScatter Plotsclimate changephenologyhypothesis formulationmountainsCaliforniapublic dataCODAP

    1218

    views

    288

    downloads

    0

    comments

    0

    adaptations

    Count me in: Increasing early detection of invasive species with community science
    In this lesson, students interpret a map of species occurrences. Then, students view and reflect on an interview with biologist Dr. Jennifer Dean, whose research includes the map that they...

    Keywords: graph interpretationInvasive SpeciesAquatic invasive speciesspatial datawomen in steminvasive plantsCitizen and Community ScienceBioGraphIrepresentation in STEMmap interpretationiMapInvasives

    828

    views

    540

    downloads

    0

    comments

    0

    adaptations

    Ethics in ecological forecasting: four case-based teaching modules
    Working with ecological data often involves ethical considerations, particularly when data are applied to address societal needs. However, data science ethics are rarely included as part of...

    Keywords: data scienceremote sensingethicsuncertaintyecological forecastingindigenous knowledgetropical forestscultural competenceconflicts of interestmarine fisheriesflying foxesfreshwater qualityinequities

    344

    views

    521

    downloads

    0

    comments

    0

    adaptations

    An Introduction to Revealing Hidden Figures through Data Sleuthing
    In this introduction to hidden figures in natural history collections (NHCs), students will read an article that gives a unique historical perspective of museums and will then participate in a...

    Keywords: identitysocial justicenatural history collectionsAttributionBCEENETdigitizationRepresentationcourse-based undergraduate research experiences (CUREs)hidden figuresdata democratizationrestorative practice

    896

    views

    290

    downloads

    0

    comments

    0

    adaptations

    Data Visualization
    This is an introduction to the idea of data visualization and the importance of presenting data for understanding.

    Keywords: data in the classroomdata visualization

    2068

    views

    680

    downloads

    0

    comments

    0

    adaptations

    Speed Data Science
    Data visualization is a foundational data science skill. One way to help students begin to learn about data visualization is to tap in to their innate creative instincts. This activity can be used...

    Keywords: data visualizationdata science educationlife sciences

    244

    views

    119

    downloads

    1

    comments

    0

    adaptations

    The Power of Data Standards
    Investigate data standards within the context of the Alpine Chipmunk and the Grinnell Study.

    Keywords: data in the classroomdata standardsdigitized natural history collectionsBLUE Fall 2019 FMNGrinnell

    2043

    views

    556

    downloads

    0

    comments

    0

    adaptations

    Analyzing current and past climate data (Project EDDIE)
    Students analyze current and past temperature and CO2 data to relate current climate change to climate of the past 450,000 years. Objectives: Are global temperatures and CO2 levels rising? How...
    1806

    views

    1157

    downloads

    0

    comments

    0

    adaptations

    Working with Datasets in R swirl
    The goal of this lesson is to learn how to import datasets into R, understand variable types, make adjustments to variables, perform basic calculations, and begin data visualization. The exercise...

    Keywords: graphingRStudioclimate change datatidyverseWorking with datasets

    1789

    views

    1001

    downloads

    0

    comments

    0

    adaptations

    Data Analysis and Cancer
    This is a flipped classroom approach, students will learn the basic content about cell-signaling, p53, and transcription factors before class. During class students will focus on data analysis...

    Keywords: Resources @ HHMI - BioInteractiveBiochemistrymolecular biologydata interpretationBiological Data Analysiscell cyclemacromoleculesGenetic diseaseCell signaling

    1764

    views

    3995

    downloads

    0

    comments

    0

    adaptations

    Module M.1 R basics for data exploration and management
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    871

    views

    526

    downloads

    0

    comments

    0

    adaptations

    Cleaning Biodiversity Data: Excel
    Access and clean an open source polar bear dataset using Excel.

    Keywords: data in the classroombiodiversity informaticsData cleaning

    2802

    views

    992

    downloads

    0

    comments

    1

    adaptations

    Module M.7 Generalized linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    472

    views

    202

    downloads

    0

    comments

    0

    adaptations

    Data on Dead Zones and a Scientist Spotlight Featuring Benjamin Negrete, Jr.
    In this lesson, students plot data and interpret graphs of the metabolic responses of fish to hypoxic conditions. Then, students view and reflect on an interview with fish ecophysiologist Benjamin...

    Keywords: fishgraphinggraph interpretationhuman-environmental interactionsdata literacysocial justicemarineCODAP

    4102

    views

    3295

    downloads

    0

    comments

    0

    adaptations

    Cleaning Biodiversity Data: A Botanical Example Using Excel or RStudio
    Access and clean an open source herbarium dataset using Excel or RStudio.

    Keywords: Exceldata in the classroomRStudiobiodiversity informaticsnatural history collectionsHerbariaData cleaning

    2835

    views

    1279

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search