You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Strategic Planning for REU and Research Readiness
    Students complete a personal strategic plan, examining their strengths, vision and mission for completing an REU or research experience.

    Keywords: undergraduate researchREUstrategic planningSWOTresumepersonal statement

    603

    views

    222

    downloads

    0

    comments

    0

    adaptations

    BSURP Guided goal-setting workshop for undergraduate researchers
    Lesson plan, slides, and worksheet for a guided research goal-setting workshop. Designed for undergraduates in the Stanford Biology Summer Undergraduate Research Program (BSURP).

    Keywords: undergraduate researchworkshopsgoalsbioBUDS

    333

    views

    171

    downloads

    0

    comments

    0

    adaptations

    Mentorship Check-In
    We provide a scaffolded discussion for research mentors and mentees to evaluate progress toward their goals, expand conceptions of mentorship, and share ideas to enhance belonging in lab.

    Keywords: Undergraduate MentorshipMentorshipFostering a Sense of Belonging

    463

    views

    107

    downloads

    0

    comments

    0

    adaptations

    Following the Data
    The video and exercise provides insight into how researchers are using digital data resources to investigate biodiversity in prairie fen wetlands.

    Keywords: data in the classroomprocess of sciencebiodiversity informatics

    3236

    views

    1012

    downloads

    0

    comments

    1

    adaptations

    Examining human impacts on tusk evolution in elephants using authentic research data using Serenity
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
    1699

    views

    1073

    downloads

    0

    comments

    0

    adaptations

    Examining human impacts on tusk evolution in elephants using authentic research data
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
    2589

    views

    5382

    downloads

    0

    comments

    1

    adaptations

    Basic Statistics
    The students will practice identifying the appropriate basic statistical tests when given a scenario and learn how to run and interpret those statistical tests in R.
    1252

    views

    725

    downloads

    0

    comments

    0

    adaptations

    Turning ecological research into engaging online modules for undergraduates through Gala/OCELOTS
    Learn how to create and implement online modules in tropical ecology for undergraduates. In an NSF-funded network, researchers and specialists in 4DEE, pedagogy, interactive data tools, and media...

    Keywords: tropical biologyOCELOTSLDC2023

    680

    views

    295

    downloads

    0

    comments

    0

    adaptations

    Two-Way ANOVA
    In this lesson, students will learn the necessary statistical terms to understand two-way ANOVA, how to visualize their data, how to perform two-way ANOVA and interpret their results, and how to...

    Keywords: undergraduate researchANOVA

    1724

    views

    709

    downloads

    0

    comments

    0

    adaptations

    Spotting Interactions: Spotted Salamanders, Beneficial Buffers, and Helpful Hydroperiods
    The purpose of this lesson is to help us better understand how we are able to conserve wetland-dependent wildlife. We will be exploring, manipulating, and analyzing data in R using a Poisson...

    Keywords: Poisson Distributionsalamandersvernal pools

    482

    views

    485

    downloads

    0

    comments

    0

    adaptations

    Evolution in Darwin's Finches: Using Darwin's Theory of Evolution by Natural Selection postulates to evaluate evidence of evolution
    Students evaluate evidence for evolution of Darwin's finches using authentic research data sets collected by Peter and Rosemary Grant.
    2571

    views

    2835

    downloads

    0

    comments

    0

    adaptations

    Drug Discovery through Ethnobotany
    In this lesson, students interpret graphs demonstrating synergy between antibiotics. Then, students view and reflect on an interview with biologist Dr. Cassandra Quave, whose research includes the...

    Keywords: graph interpretationfmndisabilityBioGraphIrepresentation in STEM

    88

    views

    12

    downloads

    0

    comments

    0

    adaptations

    Species Range Over Space and Time
    In this module, students use data from natural history collections to look at range shifts related to climate variables over different time periods.

    Keywords: data in the classroomdigital resourcesclimate changenatural history collection

    3551

    views

    1452

    downloads

    0

    comments

    0

    adaptations

    Microbiology Data Problems 2023
    This project focuses on the use of data analysis problems to introduce students to specific topics in microbiology and to give them practice in the interpretation of figures and tables of data. ...

    Keywords: data analysisundergraduate educationmicrobiologyjournal articles

    497

    views

    960

    downloads

    0

    comments

    0

    adaptations

    Evaluating the potential for immune escape: how likely is an antibody to protect against a specific SARS-CoV-2 variant?
    Commercial antibodies to the SARS-CoV-2 spike protein have been successfully used to treat people with COVID-19. Unfortunately, as the SARS-CoV-2 virus evolves, new variants have appeared that can...

    Keywords: course based undergraduate research experiencesBLASTmolecular modelingSARS-CoV-2antibodyNextstrainiCn3DSequence alignmentStructure alignment

    182

    views

    249

    downloads

    0

    comments

    0

    adaptations

    Coyote Habituation and a Scientist Spotlight on Dr. Christopher Schell
    Dr. Christopher Schell is an ecologist who uses a variety of techniques to study mammalian carnivores in urban areas. This scientist spotlight uses graphs from his study on parental habituation to...

    Keywords: conservation ecologyanimal behaviorurban ecologyInterpreting GraphsBLACK SCIENTISTS IN STEMcoyotes

    1732

    views

    911

    downloads

    0

    comments

    0

    adaptations

    Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes
    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    Keywords: biologydatabaseImmunologydata sciencebioinformaticsBiotechnologyt-cellengineeringantibodyBioengineeringAntibody EngineeringlymphocytesProteinNetChopepitopeIEDBB-cellProteasomeProteasomal Cleavage

    947

    views

    209

    downloads

    0

    comments

    0

    adaptations

    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    This lesson plan was created to teach RNAseq analysis as a part of GCAT-SEEK network. It is provided here, both in finished form and with the modifiable source code, to allow flexible adaptation to...

    Keywords: statisticsR programming languagebioinformaticsNIBLSERNAseqgene expressionCourseSourcecomputer programming

    1972

    views

    525

    downloads

    0

    comments

    0

    adaptations

    The Importance of an ORCID
    This lesson introduces students and instructors to the use of ORCIDs (Open Researcher and Contributor ID), and walks students through the process of registering for an ORCID. This module also helps...

    Keywords: ORCIDidentitysocial justicecourse-based research experiences (CUREs)AttributionBCEENETdigitizationRepresentationhidden figuresdata democratizationrestorative practice

    699

    views

    189

    downloads

    0

    comments

    0

    adaptations

    Ingestion of Microplastics by Coral
    QUBES lesson on ingestion of microplastics by coral. Lesson will give environmental background and then use R for hands-on statistical analyses, followed by critical thinking questions.

    Keywords: statisticsRenvironmentmicroplastic pollutioncoralwilcoxon

    1467

    views

    857

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search