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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Java Applets for Power and Sample Size
    This is a Java application that allows you to do power and sample-size calculations for a number of standard statistical models.

    Keywords: statisticspowerstatistical powersample sizeeffect sizestatistical tests

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    Presence of Vegetation in Relation to Slope in Yosemite Valley, California
    Here we examine the relationship between the slope of a terrain and vegetation, measured by NDVI levels. I used satellite data from Yosemite Valley to analyze and test for statistical...

    Keywords: vegetation

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    A CURE in traits and species distributions: Reproductive modes, range sizes, and natural history collections
    This course-based undergraduate research experience (CURE) focuses on developing hypotheses about how traits influence the range sizes of species. Topics with substantive content include symbioses,...

    Keywords: Evolutionbiostatisticsecologynatural history collectionsSymbiosisspecies distributionsherbariumplant functional traitsLichenReproductive biologyAppalachian mountains

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    Population Demography in Swirl
    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    Keywords: ecologyPopulation statisticslife history curves

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    Oyster Restoration Success and Water Quality in the James and Rappahannock Rivers of Virginia
    This QUBES lesson uses statistical analysis to test whether or not oyster restoration sites in Virginia are successfully increasing the number of oysters and whether or not water quality is...

    Keywords: aquatic ecologymarine ecologyggplot2Pearson correlation coefficientSimple Linear RegressionnitrogenJames Rivertidyversechesapeake baywater qualityphosphorusharmful algae bloomsvirginia

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    Exploring global reef health and human population using correlation and simple linear regression
    In this lesson, students will explore the relationship between reef cover and human disturbance. Students will manipulate a large dataset and perform normality tests, data transformations,...

    Keywords: population dynamicshumanlinear regressionconservationcorrelationRestorationcoral reefs

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    Data simulation and randomization tests
    A participatory live-coding lesson on simulating data and performing randomization tests on ecological data in R.
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    An Introduction to Statistical Learning: with Applications in R
    This book provides an introduction to statistical learning methods and is aimed for upper level undergraduate students, masters students and Ph.D. students in the non-mathematical sciences.

    Keywords: linear regressiontextbookclassificationcourseclustering coefficientR programming languagestatistical learningmachine learninglogistic regressionresamplingmodel selectionGeneralized additive modelsdecision treesprincipal components analysisMOOCResources @ QUBES - Teaching & Reference

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    Statistics for Biologists
    There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late.

    Keywords: statisticsdata analysisexperimental design

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    Teaching biostatistics using the Rule of Four
    A guide to helping intro bio students develop a deeper understanding of key statistical concepts by translating among numeric, graphical, verbal, and symbolic representations.

    Keywords: statisticsbiostatisticsintroductory biologyQuantitative reasoningBIOME 2022

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    Data Analysis for the Life Sciences
    An online stats book written completely in R

    Keywords: Rbiostatisticsstatistical analysisR Markdown

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    R for biologists
    An introductory guide to data analysis in R for life sciences researchers.

    Keywords: R

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    Statistical Exploration of Climate Data
    In this module the students will learn some basic concepts in statistical thinking about data, with emphasis on exploratory data analysis.

    Keywords: modulelinear regressioncase studyclimate datamoving averagesin-class activity

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    Regulation of Malate Dehydrogenase by Fumarate
    A "snippet" paper

    Keywords: JoCURE

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    The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior. An introduction to statistical analysis in animal behavior research
    Students investigate the role of olfaction and infochemicals on bird foraging behavior through two different quantitative activities where they generate hypotheses, create figures, conduct data...

    Keywords: Resources @ ESA - TIEEforagingfmnanimal behaviorbehavioral ecologyDIGtrophic cascades

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    statsTeachR
    statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching statistics using R at the undergraduate and graduate level.

    Keywords: statisticsmodulecase studytextbookSimulationscurriculumResources @ ICB3 - statsTeachRin-class activityproblem set

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    The effects of Avian Malaria On Pigeon Fledging Growth
    Poster on a case that combined Biology and Statistics in a student research project presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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    A Comparison of the Water Quality Between Chinatown and Bayside: Two Demographically Different Regions in NYC
    Being Published in Journal of Emerging Investigators: In this research paper, we will be comparing the water quality in Chinatown –an area with a majority poor Asian population– and Bayside –a...

    Keywords: water quality and resource allocationNew York

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    Pre-Health Students' Attitudes towards the Relative Importance of Biology and Statistics for their Preparation for Professional School
    Undergraduate research poster presented at the Undergraduate Research Symposium at the University of Pittsburgh in 2015.

    Keywords: pre-medicalMCATpre-healthAAMCMR5Presentation

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    Ethics in Synthetic Biology
    This collection of five activities provide students with an introduction to thinking about ethical concerns in human genome synthesis, gene editing, metabolic engineering, and synthetic genomes.

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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