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    Comparing Primary and Secondary Forest in a Preserve in Plano Texas: A Forest Ecology Course-based Undergraduate Research Experience (CURE) for Non-Majors and Lower-Level Majors
    An activity that can be conducted as an online or field exercise in which students develop and test their hypotheses about how forest stand characteristics differ between two forest types.

    Keywords: forest ecologyecologycourse-based undergraduate research experienceUsing Excel

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    Promoting Academic Success of Economically Disadvantaged, STEM-Interested, First- and Second-Year Undergraduate Students via the ACCESS in STEM Program at University of Washington Tacoma
    At the University of Washington Tacoma (UWT), a public, predominantly undergraduate, minority-serving institution (Asian-American, Native American, Pacific Islander, AANAPISI), the Achieving Change...

    Keywords: course based undergraduate research experiencesNSF S-STEMStudent mentoring

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    BCEENET: Connecting digitized natural history collections with course-based undergraduate research experiences
    Biological Collections in Ecology and Evolution Network (BCEENET) brings together undergraduate educators, natural history collections professionals, researchers, and data experts to support the...

    Keywords: digitized natural history collectionsBCEENETcourse-based undergraduate research experiences (CUREs)

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    HUMAN-ENVIRONMENT AQUATIC LAB (HEAL) CURE
    Course-based Undergraduate Research Experiences (CUREs) provide students with genuine research experiences and associated skills in the classroom. This resource, the HUMAN-ENVIRONMENT AQUATIC LAB...

    Keywords: undergraduate researchField researchcollaborationcourse-based research experiences (CUREs)

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    Genome Sequence Data in R using Biostrings (Swirl Lesson)
    By the end of this lesson, students should be able to load FASTA files into R as DNAStringSets and use width() and alphabetFrequency(), combined with other functions like sum() and mean(), to...

    Keywords: R programming languagecourse-based undergraduate research experienceBioinformatics and GenomicsCURECUREscourse-based research experiences (CUREs)STEM CUREsComparative genomicsBioconductor

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    A Phenology-focused CURE using Herbarium Specimen Data
    10-week course-based undergraduate research experience in which students conduct novel research on the effects of climate on phenological events (e.g., flowering) of a plant species using publicly...

    Keywords: phenologyScientific ProcessCURE

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    Links to Avida-ED spreadsheets for Active LENS and BioQUEST 2018
    Avida-ED materials and resources for Active LENS and BioQUEST 2018.

    Keywords: avida-edSummer Workshop 2018

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    Build-a-Phage Lab Manual
    This is a lab manual for phage genome synthesis that includes both Building Block synthesis and Semi-synthetic assembly.
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    Distributions CURE- Exploring Species Distribution Changes and their Drivers
    This course-based undergraduate research experience (CURE) uses digitized natural history collections data to answer questions about species distributions and their drivers. This inclusive CURE can...

    Keywords: Evolutionecologyidigbiodata management#iNaturalistcourse based undergraduate research experienceshuman impactsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsGBIFQGISBCEENETgeoreferencing

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    Strategic Planning for REU and Research Readiness
    Students complete a personal strategic plan, examining their strengths, vision and mission for completing an REU or research experience.

    Keywords: undergraduate researchREUstrategic planningSWOTresumepersonal statement

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    Using Digitized Collections-Based Data in Research: A Hands-On Crash Course in Ecological Niche Modeling
    Step-by-step, hands-on instruction on ways to access and download these specimen data, how to process climate layer data, and how to apply Maxent software to construct ecological niche models.

    Keywords: ecology labbiodiversity informaticsnatural history collectionsMicrosoft Excelbiodiversity collectionsRstatsecological niche modelingQGISENMToolsMaxent

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    Turning ecological research into engaging online modules for undergraduates through Gala/OCELOTS
    Learn how to create and implement online modules in tropical ecology for undergraduates. In an NSF-funded network, researchers and specialists in 4DEE, pedagogy, interactive data tools, and media...

    Keywords: tropical biologyOCELOTSLDC2023

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    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

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    BIO 439/539: Big Data Analysis
    Course materials for BIO 439/539: Big Data Analysis

    Keywords: Rdata analysisbig datadata managementstatistical methods

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    A discussion of C-Path, regulation science, and recommended drug treatments with Nicholas King
    Nicholas King acts as the Scientific Program Manager for the Critical Path (C-Path) Institute’s Biomarker Program. He discusses the journey he has been on to arrive at his position, what the...

    Keywords: healthCollaborative researchdrug discovery

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    (Online) Figure of the Week: Skills for Interpreting Comparative Genomics Figures
    Students use their number sense to make observations and explain or guess at patterns shown, discussing in a weekly online Q&A forum.

    Keywords: graphsonline learningmath anxietyonline forummath attitudesResources @ BIOMAAPInterpreting Graphsdiscussion forumComparative genomics

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    A Letter to a Young Scientist: Prompting Students To Reflect On And Recognize Their Own Growth As Scientists
    This activity is designed to prompt students to reflect on and recognize their own growth as scientists and, consequently, may help develop student self-efficacy and science identity.
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    Student-Led Research; Integrating Citizen Science & Field Methodology in the Ecology Classroom
    Targeting undergraduate students in lower-division ecology courses, this module guides students through authentic research. The purpose of this project is to provide hands-on research experience to...

    Keywords: undergraduate researchcitizen sciencecamera trap

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    Discrete Modeling and Structures (Course Materials)
    These are the materials for DCS course offered at Bates College. This is a sampler of structures and ways they are used to model biological and social phenomena.

    Keywords: labsagent-based modelingoctavematlabDiscrete Difference Equationsmatrix modelscoursezombiesbiomath courseeconomicsdemonstrationin-class activitylab protocolproblem sethamlet

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    Communicating with Data: Infographic with Digital Data
    Working collaboratively in teams of 2-4 researchers, students engage in targeted projects to address critical information and research needs using digital biodiversity data.

    Keywords: databasesdata in the classroomundergraduate researchdigital collectionscourse-based research experiences (CUREs)biodiversity collections

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