You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Evaluating the Quick Fix: Weight Loss Drugs and Cellular Respiration
    One key to student success in introductory and cell biology courses is a foundational knowledge of cellular respiration. This is a content area in which students often harbor misconceptions that...

    Keywords: data analysisCellular RespirationElectron Transport ChainEnergy transformationsMitochondriaOxidative phosphorylationWeight loss drugs24-dinitrophenol (DNP)

    3841

    views

    1265

    downloads

    0

    comments

    0

    adaptations

    A simple way for students to visualize cellular respiration: adapting the board game MousetrapTM to model complexity
    Lecture-based introductory biology courses are typically content-heavy as instructors strive to provide students with foundational knowledge in a broad range of topics.  One topic...

    Keywords: ATPGlycolysisCellular RespirationElectron Transport ChainKrebs Cycle

    4310

    views

    674

    downloads

    0

    comments

    0

    adaptations

    Small Organisms with Big Consequences: Understanding the Microbial World Around Us
    Creating a hands-on lab that conveys important information while simultaneously allowing for student autonomy can be difficult. This is particularly true for the field of microbiology, in which...

    Keywords: disease transmissionmicrobiologymicrobiomeliterature reviewPeer reviewPathogensHealth and WellnessThe Scientific Method

    2492

    views

    185

    downloads

    0

    comments

    0

    adaptations

    BAG Lab Manual Yeast
    This is the lab manual for yeast chromosome synthesis
    1128

    views

    390

    downloads

    0

    comments

    0

    adaptations

    Understanding COVID-19 Biology to Design a Vaccine
    This multi-part case study introduces the reader to the SARS-CoV-2 virus, replication, and treatment. Additional worksheets introduce students to bioinformatics tools of 3-D protein visualization...

    Keywords: BLASTprotein structure modelingmolecular visualization and analysisCOVID19PDB

    1710

    views

    2175

    downloads

    0

    comments

    2

    adaptations

    Targeting Misconceptions in the Central Dogma by Examining Viral Infection
    Understanding the central dogma and how changes in gene expression can impact cell function requires integration of several topics in molecular biology. Students often do not make the necessary...

    Keywords: datatranscriptionvirustranslationprotein functionmembrane transportPredictions

    2934

    views

    451

    downloads

    0

    comments

    0

    adaptations

    Using Musical Instruments to Model Negative Feedback in the Hypothalamo-Pituitary-Target Gland Axes
    Homeostasis and negative feedback are crucial, yet difficult, concepts for undergraduates, particularly in the context of the hypothalamo-pituitary axes. This interactive activity was designed to...

    Keywords: cell-cell communicationhomeostasisnegative feedback

    1060

    views

    147

    downloads

    0

    comments

    0

    adaptations

    CRISPR/Cas9 in yeast: a multi-week laboratory exercise for undergraduate students
    Providing undergraduate life-science students with a course-based research experience that utilizes cutting-edge technology, is tractable for students, and is manageable as an instructor is a...

    Keywords: bioinformaticsPCRphenotypingCRISPR/Cas9gene editingcloningGenotypingRestriction enzyme

    3118

    views

    1107

    downloads

    0

    comments

    0

    adaptations

    Teaching Protein Structure Modeling
    New strains of microbes have been regularly discovered and brought into a laboratory for study in many different directions. When a new microbial genome is sequenced and assembled, the homologues...

    Keywords: Microbiology Educationbioinformaticsprotein structure modeling

    365

    views

    36

    downloads

    0

    comments

    0

    adaptations

    COVID-19: Molecular Basis of Infection-ADAPTATION
    This case was written in Spring 2020 during the COVID-19 pandemic. It focuses on understanding the structure and interaction of the SARS-Cov-2 viral spike protein that facilitates infection in...

    Keywords: infectionvaccinemolecular visualization and analysisCOVID19PDBSARS-CoVMolecular Case Study

    1229

    views

    1648

    downloads

    0

    comments

    0

    adaptations

    Using Synthetic Biology and pClone Red for Authentic Research on Promoter Function: Genetics (analyzing mutant promoters)
    Students often memorize the definition of a transcriptional promoter but fail to fully understand the critical role promoters play in gene expression.  This laboratory lesson allows students...

    Keywords: bacteriasynthetic biologygene regulationtranscriptionstudent researchcentral dogmacloningpromoterreporter gene/protein

    2889

    views

    671

    downloads

    0

    comments

    0

    adaptations

    Application of a Bacterial Experimental Evolution System to Visualize and Teach Evolution in Action: A Course-Based Undergraduate Research Experience
    Concepts of evolution are typically taught through examples of extremely long timescales, which do not always resonate broadly. Here, we describe a course-based undergraduate research experience...

    Keywords: EvolutionmutationcompetitionNatural Selectionregulationstructure and functionreproductive fitnessgenotype to phenotypehomologs

    3141

    views

    251

    downloads

    0

    comments

    0

    adaptations

    Vegetation Greening: A Snapshot from the Andean Tropics
    This online module explores how satellite images are used to study vegetation greenness and, using Ecuador as an example, demonstrates how tropical vegetation experienced increased greenness...

    Keywords: remote sensingTime Series AnalysisEarth ObservationEarth and Space SciencesgeographyGIMMS NDVIgreening and browningtropical Andes

    270

    views

    71

    downloads

    0

    comments

    0

    adaptations

    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...

    Keywords: statisticsspecies interactionsQuantitative reasoninggraphsCommunity EcologyParasitologyfood webs

    2583

    views

    213

    downloads

    0

    comments

    0

    adaptations

    Assessing Urban Biodiversity With the eBird Citizen Science Project: A Course-Based Undergraduate Research Experience (CURE) Module
    The eBird citizen science module takes advantage of technology tools and online resources developed by the Cornell Laboratory of Ornithology (http://ebird.org) to achieve several learning...

    Keywords: datacitizen sciencecommunityBiodiversitySpecieshypothesishabitat

    3116

    views

    893

    downloads

    0

    comments

    0

    adaptations

    Build Multiomic and Visualization Skills in Bioscience Lecture
    This resource promotes inclusive learning by using all free platforms to extend the central dogma to an applied experience. Genomics is focused on with literature reviews that are performed to...

    Keywords: geneticsBiochemistryBiology and Biochemistry EduationProtein StructureBioinformatics and GenomicsFunctional GenomicstranscriptomicsproteomicsRNAseqClinical genomicsprotein structure modelingInclusive teaching3D protein structure /function analysisinclusive classrooms3D protein structuresinclusivegene

    1099

    views

    225

    downloads

    0

    comments

    0

    adaptations

    The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior
    Students investigate the role of olfaction and infochemicals on bird foraging behavior through three different quantitative modules. In this module students create graphs, generate statistics, draw...

    Keywords: Resources @ ESA - TIEEforagingfmnbehavioral ecologyDIGtrophic cascadesAntarctic foodd webs

    2803

    views

    887

    downloads

    0

    comments

    2

    adaptations

    Follow the Sulfur: Using Yeast Mutants to Study a Metabolic Pathway
    Students are frequently overwhelmed by the complexity of metabolic pathways and they think they have "learned" the pathway when they have memorized the individual reactions.  This...

    Keywords: SelectionyeastMetabolismcysteinemediamethioninemutantPathwaysulfur

    2396

    views

    589

    downloads

    0

    comments

    0

    adaptations

    Teaching Cancer Biology Through a Lens of Social Justice
    The biology classroom is not separate from the greater context of society; social issues can and should be presented in connection with the content. Here we present an example of antiracist...

    Keywords: assessmentcancersocial justicePOGILAlignmentPublic ExamPublic

    4543

    views

    699

    downloads

    0

    comments

    0

    adaptations

    Implementing an online module about measuring carbon stocks in an undergraduate Earth Science course
    In this implementation of a case study in which high technology was used to measure carbon stocks in a tropical forest, earth science students in this 4-year college in Oklahoma applied concepts...

    Keywords: climate changephotosynthesisbiomasscarbon cyclegreenhouse gas effect

    346

    views

    29

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search