You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Intro to DNA Subway Blue Line
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 1 hr 50 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    3023

    views

    216

    downloads

    0

    comments

    0

    adaptations

    Intro to DNA Barcoding
    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 30-45 min lecture or lab class period.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignment

    1832

    views

    218

    downloads

    0

    comments

    0

    adaptations

    Happy Blue Baby: MCQs for large classes
    Multiple choice questions for the Happy Blue Baby case study pre-work

    Keywords: mutationHemoglobinmolecular visualization and analysisPDBMolecular Case Study

    844

    views

    309

    downloads

    0

    comments

    0

    adaptations

    Engaging students in data exploration using digital biodiversity databases: BLUE Data Network
    Slides for BLUE presentation at 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: undergraduate researchnatural historyBiodiversitynatural history collectionsbiodiversity collectionsBLUEbiodiversity literacy

    1096

    views

    281

    downloads

    0

    comments

    0

    adaptations

    Using Data Science Skills and Digitized Natural History Collections Data to Investigate Ecological and Evolutionary Principles in Introductory Biology Courses
    Session presentation Biodiversity Literacy in Undergraduate Education project at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: data sciencenatural history collections2019 QUBES/BioQUEST Summer WorkshopBLUEdigitized natural history collections

    1325

    views

    303

    downloads

    0

    comments

    0

    adaptations

    DNA Barcoding & Biodiversity databases
    This resource pairs DNA barcoding databases with Biodiversity databases. Students collect their insect specimens in the field and use BLAST and BOLD to identify their species. They then use...
    1037

    views

    653

    downloads

    0

    comments

    0

    adaptations

    Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom
    Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: data sciencenatural history collections2019 QUBES/BioQUEST Summer WorkshopBLUE

    1249

    views

    129

    downloads

    0

    comments

    0

    adaptations

    Water We Doing: A Deep Dive Into Sustainable Ocean Management & Blue Economies
    This lesson explores the concept of blue economies and includes a detailing lesson in R that involves basic statistics and building complex graphics.

    Keywords: linear regressionRStudioblue economy

    677

    views

    418

    downloads

    0

    comments

    0

    adaptations

    The career of a shark researcher with Dr. Chris Lowe
    From blue-collar to deep blue research, professor of marine biology and director of the Shark Lab at California State University discusses his life journey and his fascinating research of sharks,...

    Keywords: marine biologyCareer Exploration

    478

    views

    138

    downloads

    0

    comments

    0

    adaptations

    Natural history collections data and Biodiversity Literacy in Undergraduate Education (BLUE)
    Presentation made by Elizabeth Ellwood et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of...

    Keywords: Ecological Society of America

    1389

    views

    405

    downloads

    0

    comments

    0

    adaptations

    6-025-WhalesAndKrill-ModelingScenario
    Students will use Excel to observe qualitative behavior in a simulation of a predator-prey model, with blue whales and krill as the predator and prey populations, respectively.

    Keywords: krillwhalepredatpr-prey

    327

    views

    1162

    downloads

    0

    comments

    0

    adaptations

    Happy Blue Baby
    This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...

    Keywords: mutationHemoglobinmolecular visualization and analysisPDBMolecular Case Study

    1497

    views

    551

    downloads

    0

    comments

    3

    adaptations

    Java BankAccount demo, using Blue J, v2
    CPSC1100 UTC, Spring 2017. Exercises are modified from Big JAVA.

    Keywords: videosjavagenomicsyoutube

    1207

    views

    316

    downloads

    0

    comments

    0

    adaptations

    Using Natural History Collection Data in Your CURE: BLUE BIOME 2020
    This is the report for the BLUE working group from the Biome Institute 2020. It reflects our group's efforts and products related to CUREs and Natural History Collection Digital Data.

    Keywords: digitized natural history collectionsBIOME 2020Biodiversity Literacy in Undergraduate Education

    1062

    views

    294

    downloads

    0

    comments

    0

    adaptations

    Integrating digitized biodiversity data exploration into the undergraduate biology curriculum
    Poster on the Biodiversity Literacy in Undergraduate Education (BLUE) project presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity

    Keywords: Biodiversitybiodiversity collectionsBLUEbiodiversity literacy

    968

    views

    204

    downloads

    2

    comments

    0

    adaptations

    Using DNA Subway to Analyze Sequence Relationships
    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

    Keywords: phylogeneticsNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data typesIncubated at NIBLSE

    3009

    views

    567

    downloads

    0

    comments

    2

    adaptations

    Insects of Alberta - Visual Guide to Terrestrial Orders Adults
    A visual guide to insect orders found in Alberta created for undergraduate students and those new to insect identification. Visual images and descriptions are provided for key features and...

    Keywords: BiodiversityguideentomologyinsectsBLUEpollinatorsinsectidentificationAlberta

    113

    views

    97

    downloads

    0

    comments

    0

    adaptations

    Hemiptera of Alberta: Visual Guide to Common Terrestrial Families (Adults)
    A visual guide to common Hemiptera families found in Alberta created for undergraduate students and those new to insect identification. Visual images and descriptions are provided for key features...

    Keywords: BiodiversityguideentomologyBLUEpollinatorsinsectAlbertaHeteropteraHemipteraHomoptera

    99

    views

    121

    downloads

    0

    comments

    0

    adaptations

    Mysterious Occurrences Instructors Notes
    Answer Key associated with Mysterious Occurrences Module

    Keywords: digital resourcesBiodiversityconservation sciencePlant Resilience

    197

    views

    48

    downloads

    0

    comments

    0

    adaptations

    Happy Blue Baby
    This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...

    Keywords: mutationHemoglobinmolecular visualization and analysisgenetic basisPDBMolecular Case StudyMol*

    1214

    views

    2406

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search