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    BioNumbers: The Database of Useful Biological Numbers
    A database of biological numbers that you can search and browse.
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    From Dirt to Streptomyces DNA
    The purpose of this semester-long Lesson is to give students an authentic, course-based undergraduate research experience during which they learn basic and advanced microbiological and molecular...

    Keywords: MetabolismAntibiotic productionrRNA genesSecondary metabolitesStreptomyces

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    Exploring the City of Biofilms: An Engaging Analogy-Based Activity for Students to Learn Biofilms
    Multicellular biofilms constructed by microbes are key aspects of microbiology with significant implications in various fields, including medicine, environmental science, and biotechnology. While...

    Keywords: bacteriaBiofilmsquorum sensing

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    Designing an Asynchronous, Self-Led Aquatic Ecology Field Trip
    Due to the COVID-19 pandemic and increasing need to teach students online, aquatic scientists are looking for ways to give students field experiences virtually. Asynchronous, self-led field trips...

    Keywords: observationecosystem structureexploration

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    Interactive Video Vignettes (IVVs) to Help Students Learn Genetics Concepts
    Many video resources exist to teach Mendelian genetics, but most consist of passive delivery of information rather than active construction of knowledge by users. We have created two interactive...

    Keywords: genotypephenotypeallelespedigreedominanceHardy-Weinberg equilibriumInheritance

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    Why Meiosis Matters: The case of the fatherless snake
    A compelling reason to learn something can make all the difference in students’ motivation to learn it.  Motivation, in turn, is one of the key attitudes that drives learning.  This story...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

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    Maria vs Malaria - AR Adaptation
    This case study focuses on a specific enzyme Lactate Dehydrogenase (LDH) in the malarial parasite as a target for treating malaria. Students will be able to view selected molecular views from the...

    Keywords: bioinformaticsAugmented RealityLarge class sizemolecular visualizationstructure-functionuniprotProtein Data BankMolecular Case StudyMolecular CaseNet

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    3-034-CarSuspension-ModelingScenario
    We examine the spring-mass-dashpot that is part of a car suspension, how the ride is related to parameter values, and the effect of changing the angle of installation. We model a ``quarter car'',...

    Keywords: designspring-mass-dashpotspring constantunderdampingcar suspensionsuspension tolerancestatic equilibrium

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    1-132-DigoxinElimination-ModelingScenario
    We model the concentration of digoxin eliminated from the human body at a rate proportional to the concentration. This is a ``first-order reaction'' in the language of pharmacokinetics -- the study...

    Keywords: nullclinespharmacokineticsdigoxindrug eliminationtwo compartment

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    Venom Diversity & Evolution in Reptiles and Amphibians - An education module for university students
    This module contains information for a three part series introducing the venom system in reptiles and discussing it in an evolutionary context. In the first part venom and its ecological roles are...

    Keywords: geneticsEvolutionecologyHerpetologyAmphibans and ReptilesVenom

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    1-082-MirroMirror-ModelingScenario
    This project models the ``Foucault Knife Edge Test,'' an optical test commonly used by amateur astronomers who make their own mirrors for reflecting telescopes. The goal of the test is to estimate...

    Keywords: astronomymirror climate change mitigation ocean deacidificationopticstelescopelensFoucaultinterpolation

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    1-092-DashItAll-ModelingSenario
    This project uses very basic physics, Newton's Second Law of Motion, to model the motion of a sprinter running down a track. We derive the classic Hill-Keller model for a sprinter exerting...

    Keywords: datarunningsprintHill-Kellerworld recordOlympics

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    1-150-CancerTherapy-ModelingScenario
    This activity builds upon elementary models on population growth. In particular, we compare two different treatment models of cancer therapy where in one, surgery happens before therapy and in the...

    Keywords: population dynamicsphage therapyexponential growthcancerwater treatmentdecaysurgery

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    Grassy Narrows and Muskrat Falls Dam: Hypothesis Testing and t-Tests
    Students are introduced to concepts of hypothesis testing using elementary hypothesis tests, t-tests, and p-values as they compare a given fish population for methylmercury levels (using real and...

    Keywords: statisticsmathematicsbiostatisticsecologybiologygraphingp-valuest-testshypothesis testingin-class activityZoologymercury biogeochemistrybiostatistics - generalfish populationqbccBiogeochemical cyclesInterpret graphsSolving Equations and InequalitiesConcepts in StatisticsElementary Hypothesis TestingMethylmercurydamsBioaccumulationtraditional dietsmercurymercury poisoningnative peopleindigenous populationCanadahydroelectricexplaining statisticsusing statisticsMake probability calculations

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    Lizard cold tolerance and extreme weather events: a scientist spotlight featuring Dr. Shane Campbell-Staton
    Students interpret experimental and observational data about patterns in cold tolerance in the green anole. They reflect on the experience and identity of the lead researcher based on a video...

    Keywords: climate changeNatural Selectionenvironmental variationphenotypic plasticityacclimationenvironmental conditions

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    The Evolution (and Coevolution) of Flowering Plants Virtual Classroom
    In this lab, you will explore the diversity of flower and fruit adaptations that have evolved to accomplish pollination and seed dispersal and you will investigate the coevolution of angiosperms...

    Keywords: digital resourcespollination biologynatural history collectionsFloral Diversity

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    Data is the New Science
    In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

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    The ODD protocol: A review and first update
    The ‘ODD’ (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based models (ABMs).

    Keywords: agent-based modelabmstandardizationODD protocolModel descriptionModel formulationScientific communicationChapter 3model replic

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    Diseasebots
    This module explores the effects of host density on contact rates and transmission of pathogens or mutualist symbionts using a hands-on simulation, a computer agent-based model in NetLogo, and an...

    Keywords: NetLogoDisease ecologydensity dependenceSpreadsheethost-parasitemutualismOpen-inquiry group projectsmanipulative models (‘beanbag biology’)plotting

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    Natural Selection and Galápagos Finches
    A worksheet and accompanying data set that guides students through making and interpreting frequency distributions, selection differentials, and fitness functions.

    Keywords: EvolutionResources @ HHMI - BioInteractive

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